Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT0305	BT0306	BT0307	BT0308	BT0309
mouse_post_colonization	Post-colonization (Day 2) - Cage5;Mouse1	-0.6	-1.5	N.D.	-0.5	+0.2
mouse_post_colonization	Post-colonization (Day 1) - Cage4;Mouse5	-0.5	-1.0	N.D.	-0.4	-0.3
nitrogen source	Glucuronamide (N)	-0.4	-0.4	N.D.	-0.3	-1.0
mouse_post_colonization	Post-colonization (Day 1) - Cage7;Mouse2	-0.4	-0.9	N.D.	-0.8	-0.0
carbon source	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)	-0.2	+0.0	N.D.	-1.3	-0.6
carbon source	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)	-0.2	-0.2	N.D.	-0.9	-0.7
carbon source	D-Glucose 5 mg/ml (C)	+0.2	-0.7	N.D.	-0.9	-0.5
mouse_coculture	cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.8	N.D.	+0.2	-0.8
carbon source	Galactan from Potato; autoclaved 2.5 mg/ml (C)	+0.4	-0.5	N.D.	-0.6	-0.9
mouse_post_colonization	Post-colonization (Day 6) - Cage6;Mouse1	-1.0	-0.7	N.D.	+0.1	+0.2
mouse_post_colonization	Post-colonization (Day 4) - Cage6;Mouse1	-0.7	-1.0	N.D.	+0.2	+0.1
stress	Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.05 mM	+0.2	+0.4	N.D.	-0.6	-0.8
mouse_post_colonization	Post-colonization (Day 2) - Cage3;Mouse2	-0.8	-0.7	N.D.	+0.3	+0.3
stress	BHIS with Antimycin A 0.2 mM	+0.3	+0.1	N.D.	+0.5	-1.5
mouse	Post-dosage t1 (Day 1) - Cage1C;Mouse1	-0.3	-0.9	N.D.	+0.5	+0.3
stress	BHIS with Chlorhexidine diacetate salt 0.0015625 mM	+0.4	+0.4	N.D.	+0.2	-1.1
carbon source	Lactulose 20mM (C)	+0.3	-1.1	N.D.	+0.5	+0.2
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen	+0.7	-0.9	N.D.	+0.8	+0.0
stress	BHIS with Dimethyl Sulfoxide 0.05 vol%	+0.3	+0.6	N.D.	+0.5	-0.8
stress	Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM	-0.0	+0.5	N.D.	-0.6	+0.8
stress	BHIS with Dimetridazole 0.00625 mM	-0.1	+0.9	N.D.	+0.7	-0.8
stress	Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM	+0.3	-0.6	N.D.	+0.7	+0.5
carbon source	Hyaluronic from Streptococcus equi	+0.6	-0.6	N.D.	+1.1	-0.3
stress	BHIS with Doxycycline hyclate 0.000390625 mM	+0.3	+0.3	N.D.	+1.3	-1.0
stress	BHIS with Thioridazine 0.0125 mM	+0.3	-0.4	N.D.	+0.7	+0.8
stress	Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml	+0.1	+0.9	N.D.	-0.0	+0.9
phage	SJC16_cps8_10MOI	+0.2	+0.7	N.D.	+0.7	+0.4
stress	BHIS with Chlorpromazine 0.1 mM	+0.2	+0.4	N.D.	+1.3	+0.2
stress	BHIS with Thioridazine 0.0125 mM	+0.7	+0.2	N.D.	+1.1	+0.5
phage	ARB14_cps1_0.1MOI	+0.4	+0.9	N.D.	+0.5	+0.6