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Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0075 and BT0076 are separated by 460 nucleotides
BT0076 and BT0077 are separated by 76 nucleotides
BT0077 and BT0078 are separated by 258 nucleotides
BT0078 and BT0079 are separated by 298 nucleotides
BT0075: BT0075 - conserved hypothetical protein (NCBI ptt file), at 72,433 to 72,723
BT0075
BT0076: BT0076 - transposase (NCBI ptt file), at 73,184 to 74,416
BT0076
BT0077: BT0077 - conserved hypothetical protein (NCBI ptt file), at 74,493 to 74,999
BT0077
BT0078: BT0078 - putative DNA repair protein (NCBI ptt file), at 75,258 to 75,710
BT0078
BT0079: BT0079 - putative anti-restriction protein (NCBI ptt file), at 76,009 to 76,542
BT0079
Group
Condition
BT0075
BT0076
BT0077
BT0078
BT0079
stress
BHIS with Fusidic 0.004 mg/ml
N.D.
+0.3
-2.8
+0.0
-0.4
carbon source
Mannan from Saccharomyces cerevisiae (C)
N.D.
-0.5
-0.9
-0.0
-1.4
stress
BHIS with Cephalothin 0.1 mM
N.D.
-0.3
-0.7
-0.6
-1.1
carbon source
D-Xylose (C)
N.D.
-0.3
-2.1
-0.1
-0.2
mouse_post_colonization
Post-colonization (Day 10) - Cage5;Mouse5
N.D.
+0.0
-2.6
+0.2
+0.2
stress
Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM
N.D.
-0.0
-1.9
-0.6
+0.4
stress
BHIS with Simvastatin 30 uM
N.D.
-0.1
-1.9
-0.6
+1.0
mouse_post_colonization
Post-colonization (Day 8) - Cage7;Mouse2
N.D.
-0.0
-1.7
+0.5
-0.3
nitrogen source
L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
N.D.
-0.2
+0.6
-0.1
-1.8
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
N.D.
-0.4
-1.3
+0.6
-0.4
mouse_post_colonization
Post-colonization (Day 14) - Cage3;Mouse1
N.D.
+0.5
-1.1
+0.5
-1.4
stress
BHIS with Simvastatin 30 uM
N.D.
-0.5
-2.2
+0.4
+0.9
stress
BHIS with Zinc Pyrithione 0.05 mM
N.D.
-0.1
-2.2
+0.6
+0.3
stress
BHIS with Dimethyl Sulfoxide 10 vol%
N.D.
-0.0
+0.6
-0.5
-1.4
stress
BHIS with Lithocholic 0.4 mg/ml
N.D.
+0.1
-1.3
-0.7
+0.7
carbon source
Lactulose 20mM (C)
N.D.
-0.0
-1.3
-0.6
+0.9
stress
BHIS with Rifampicin 0.000048828125 mM
N.D.
+0.0
-1.8
+0.5
+0.3
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
N.D.
+0.2
-1.1
-0.6
+0.6
mouse_post_colonization
Post-colonization (Day 6) - Cage3;Mouse4
N.D.
+0.3
-1.6
+0.2
+0.5
mouse_post_colonization
Post-colonization (Day 2) - Cage1;Mouse3
N.D.
-0.6
-0.8
+0.7
+0.5
stress
BHIS with Chenodeoxycholic 0.25 mg/ml
N.D.
+0.2
-0.7
-0.7
+1.0
mouse_post_colonization
Post-colonization (Day 10) - Cage6;Mouse2
N.D.
+0.4
-1.2
+1.0
-0.0
stress
BHIS with DAMPA 60 uM
N.D.
-0.2
-0.9
+0.0
+1.5
stress
BHIS with Cephalothin 0.2 mM
N.D.
+0.7
-1.1
+0.7
+0.1
stress
Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM
N.D.
+0.1
+1.1
+0.4
-1.2
mouse_post_colonization
Post-colonization (Day 1) - Cage2;Mouse2
N.D.
-0.5
-0.6
+1.1
+0.7
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
N.D.
-0.3
+1.8
-0.6
-0.1
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
N.D.
-0.4
+2.4
-0.1
+0.4
survival
aerobic shaking 48 hr copy A
N.D.
+0.2
+2.0
+0.3
+1.1
survival
aerobic shaking 48 hr copy B
N.D.
-0.3
+2.3
+0.8
+1.7
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