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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0009 and BT0010 are separated by 54 nucleotides
BT0010 and BT0011 are separated by 205 nucleotides
BT0011 and BT0012 are separated by 59 nucleotides
BT0012 and BT0013 are separated by 31 nucleotides
BT0009: BT0009 - phosphate-binding periplasmic protein precursor, putative ABC transporter (NCBI ptt file), at 5,632 to 6,741
BT0009
BT0010: BT0010 - hypothetical protein (NCBI ptt file), at 6,796 to 7,869
BT0010
BT0011: BT0011 - hypothetical protein (NCBI ptt file), at 8,075 to 8,923
BT0011
BT0012: BT0012 - conserved hypothetical protein (NCBI ptt file), at 8,983 to 10,149
BT0012
BT0013: BT0013 - hypothetical protein (NCBI ptt file), at 10,181 to 10,723
BT0013
Group
Condition
BT0009
BT0010
BT0011
BT0012
BT0013
stress
BHIS with Chenodeoxycholic 0.25 mg/ml
-0.3
-0.2
-0.9
-0.9
-1.2
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-0.7
+0.9
-0.6
+0.1
-2.6
stress
BHIS with 2-Mercaptopyridine N-oxide 0.2 mM
-0.4
+0.4
-0.3
-0.5
-2.0
stress
BHIS with Nitrofurantoin 0.15 mM
-0.4
-1.4
+0.4
-0.2
-1.0
stress
Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
+0.1
-1.6
+0.4
+0.5
-1.9
nitrogen source
L-Glutamine (N)
+0.2
-1.4
+0.4
-0.6
-1.0
stress
BHIS with Geneticin G418 0.2 mM
-0.3
+0.8
-0.3
-0.6
-1.6
stress
Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM
+0.3
-1.3
+0.0
+0.3
-1.2
stress
BHIS with Irgasan 0.0125 mM
-0.2
+0.6
-0.7
+0.3
-1.9
carbon source
D-Trehalose 20mM (C)
-0.7
-0.5
-0.8
-0.6
+0.7
stress
BHIS with Cefoxitin 0.0125 mM
-0.4
+0.7
-0.6
-0.3
-1.3
mouse_post_colonization
Post-colonization (Day 12) - Cage7;Mouse3
+0.6
-0.7
+0.2
+0.1
-1.7
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
-0.2
+0.3
+0.9
+0.2
-2.4
stress
BHIS with Chlorpromazine 0.2 mM
-0.3
+0.5
-1.3
+0.8
-0.8
stress
Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM
-1.1
+0.9
+0.1
-0.1
-1.0
mouse
Post-colonization (Day 7) - Cage1B;Mouse5
+0.7
+0.3
-0.4
+0.2
-1.7
stress
BHIS with Zinc Pyrithione 0.0125 mM
-0.9
+1.3
-0.3
-0.4
-0.3
stress
BHIS with Cephalothin 0.1 mM
-1.1
+1.6
-0.7
+0.1
-0.4
stress
BHIS with Chlorpromazine 0.2 mM
-0.4
+1.6
-0.5
+0.1
-1.0
stress
BHIS with Simvastatin 30 uM
-0.9
+0.6
-0.5
-0.3
+1.1
stress
BHIS with Ceftazidime 0.5 mg/ml
-0.4
-0.8
-0.6
+0.7
+1.3
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
+0.2
-0.7
-1.0
+0.7
+1.0
nitrogen source
L-aspartic (N)
-1.4
+0.1
+0.6
-1.0
+2.1
stress
Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM
-0.3
+1.1
-0.4
-0.5
+0.9
stress
BHIS with Sulfamonomethoxine 0.1 mM
-0.3
+1.9
-0.2
+0.6
-1.1
stress
BHIS with Simvastatin 30 uM
+0.2
+0.7
+0.3
-1.3
+1.5
carbon source
Mannan from Saccharomyces cerevisiae (C)
-1.0
+0.4
+1.0
-0.0
+1.4
carbon source
Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
-0.5
-0.2
+0.9
+0.1
+1.7
phage
HNL05_cps7_1MOI
-0.1
+1.7
+0.2
+0.8
+0.3
phage
SJC16_cps8_10MOI
+0.1
+1.3
+0.1
+0.6
+1.5
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