Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntp5482_14 and p5482_15 are separated by 4 nucleotidesp5482_15 and p5482_16 overlap by 4 nucleotidesp5482_16 and p5482_17 are separated by 536 nucleotidesp5482_17 and p5482_18 are separated by 10 nucleotides p5482_14: p5482_14 - hypothetical protein (NCBI), at 13,508 to 14,152 _14 p5482_15: p5482_15 - TraM-like protein (NCBI), at 14,157 to 15,047 _15 p5482_16: p5482_16 - TraN-like protein (NCBI), at 15,044 to 16,141 _16 p5482_17: p5482_17 - hypothetical protein (NCBI), at 16,678 to 16,887 _17 p5482_18: p5482_18 - hypothetical protein (NCBI), at 16,898 to 17,605 _18
Group Condition p5482_14 p5482_15 p5482_16 p5482_17 p5482_18
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.4 -0.4 -0.7 -1.0 -0.4
mouse_post_colonization Post-colonization (Day 8) - Cage4;Mouse4 -0.2 -0.3 -0.5 -1.0 -0.3
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse3 +0.1 -0.3 -0.6 -1.0 -0.3
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -0.2 -0.3 -0.5 -0.8 -0.3
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 +0.3 -0.2 -0.7 -1.1 -0.4
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.1 -0.3 -0.6 -0.8 -0.4
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.4 -0.0 +0.1 -1.2 -0.4
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 +0.1 -0.4 -0.7 -0.6 -0.3
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse4 +0.2 -0.4 -0.8 -0.5 -0.3
stress BHIS with Simvastatin 30 uM -0.6 +0.1 -0.4 -1.1 +0.2
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM +0.4 -0.3 -0.5 -0.9 -0.3
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 +0.4 -0.0 -0.4 -1.0 -0.4
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM +0.4 -0.1 -0.5 -1.0 -0.2
stress BHIS with Chlorpromazine 0.1 mM +0.7 -0.6 -0.8 -0.4 -0.4
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +0.4 -0.2 -0.6 -0.4 -0.4
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 +0.4 -0.1 -0.7 -0.6 -0.3
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse1 +0.4 -0.3 -0.4 -0.6 -0.3
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse3 +0.5 -0.3 -0.5 -0.6 -0.3
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 +0.6 -0.4 -0.4 -0.9 -0.1
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.9 -0.2 -1.2 -0.5 +0.1
stress BHIS with Paraquat dichloride 0.1 mg/ml +0.4 -0.4 +0.4 -1.1 -0.2
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 +0.6 +0.1 -0.6 -0.6 -0.2
stress BHIS with Dimethyl Sulfoxide 10 vol% -1.0 +0.1 -0.5 +0.1 +0.6
stress BHIS with 5-Fluorouracil 0.2 mM +0.8 -0.4 -0.4 -0.3 -0.4
stress BHIS with 5-Fluorouracil 0.1 mM +0.8 -0.3 -0.3 -0.5 -0.2
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.9 -0.0 -0.3 +0.7 +0.2
stress BHIS with 5-Fluorouracil 0.1 mM +1.4 -0.3 -0.5 -0.2 -0.6
stress BHIS with Dimethyl Sulfoxide 9 vol% -0.8 +0.2 -0.4 +0.6 +0.7
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +1.4 -0.1 -0.3 -0.2 -0.3
nitrogen source L-aspartic (N) -0.6 +1.1 +0.5 -0.1 +0.0
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