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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3793 and Rru_A3794 are separated by 155 nucleotides
Rru_A3794 and Rru_A3795 are separated by 134 nucleotides
Rru_A3795 and Rru_A3796 overlap by 4 nucleotides
Rru_A3796 and Rru_A3797 are separated by 331 nucleotides
Rru_A3793: Rru_A3793 - molybdopterin biosynthesis protein (NCBI), at 4,343,029 to 4,343,844
_A3793
Rru_A3794: Rru_A3794 - Cysteine synthase (NCBI), at 4,344,000 to 4,345,019
_A3794
Rru_A3795: Rru_A3795 - Transcriptional Regulator, BadM/Rrf2 family (NCBI), at 4,345,154 to 4,345,609
_A3795
Rru_A3796: Rru_A3796 - DNA/pantothenate metabolism flavoprotein (NCBI), at 4,345,606 to 4,346,880
_A3796
Rru_A3797: Rru_A3797 - 2-polyprenylphenol 6-hydroxylase (NCBI), at 4,347,212 to 4,348,771
_A3797
Group
Condition
Rru
_A3793
Rru
_A3794
Rru
_A3795
Rru
_A3796
Rru
_A3797
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
N.D.
N.D.
-2.0
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-1.6
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-1.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-1.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-1.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-1.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-1.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
N.D.
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
-0.7
smn_rich
SMN_rich
N.D.
N.D.
N.D.
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
N.D.
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.5
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
N.D.
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
N.D.
N.D.
-0.5
smn_rich
SMN_rich
N.D.
N.D.
N.D.
N.D.
-0.5
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
+0.4
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
+0.4
light
acetate; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
+0.6
light
acetate; Light intensity 75 uM
N.D.
N.D.
N.D.
N.D.
+0.6
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
+0.7
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
N.D.
N.D.
+0.8
light
acetate; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
+0.8
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
+1.6
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
+1.6
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