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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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500 nt
Rru_A3772 and Rru_A3773 overlap by 4 nucleotides
Rru_A3773 and Rru_A3774 are separated by 1 nucleotides
Rru_A3774 and Rru_A3775 are separated by 158 nucleotides
Rru_A3775 and Rru_A3776 are separated by 147 nucleotides
Rru_A3772: Rru_A3772 - Protein of unknown function UPF0054 (NCBI), at 4,320,648 to 4,321,250
_A3772
Rru_A3773: Rru_A3773 - CBS domain protein (NCBI), at 4,321,247 to 4,322,203
_A3773
Rru_A3774: Rru_A3774 - Apolipoprotein N-acyltransferase (NCBI), at 4,322,205 to 4,323,800
_A3774
Rru_A3775: Rru_A3775 - Transcriptional Regulator, XRE family (NCBI), at 4,323,959 to 4,324,591
_A3775
Rru_A3776: Rru_A3776 - Methionine adenosyltransferase (NCBI), at 4,324,739 to 4,325,908
_A3776
Group
Condition
Rru
_A3772
Rru
_A3773
Rru
_A3774
Rru
_A3775
Rru
_A3776
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
-1.7
N.D.
-1.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-2.5
N.D.
-0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.1
N.D.
-0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.0
N.D.
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-2.0
N.D.
+0.1
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
N.D.
-1.4
N.D.
-0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.8
N.D.
-0.5
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-1.1
N.D.
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-1.1
N.D.
-0.1
N.D.
carbon source
Succinate (C)_noKan
N.D.
-1.1
N.D.
-0.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.6
N.D.
-0.4
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.7
N.D.
-0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.7
N.D.
-0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.9
N.D.
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.2
N.D.
+0.4
N.D.
smn_rich
SMN_rich
N.D.
-0.7
N.D.
-0.2
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.6
N.D.
-0.2
N.D.
smn_rich
SMN_rich_noKan
N.D.
-0.9
N.D.
+0.2
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.5
N.D.
-0.2
N.D.
smn_rich
SMN_rich_noKan
N.D.
-0.3
N.D.
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.7
N.D.
+0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.6
N.D.
+0.2
N.D.
anaerboic nitrogen source
Low light with N2
N.D.
+1.0
N.D.
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.7
N.D.
+0.3
N.D.
light
acetate; Light intensity 18 uM
N.D.
+1.5
N.D.
-0.3
N.D.
light
acetate; Light intensity 75 uM
N.D.
+1.3
N.D.
+0.4
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.6
N.D.
+1.2
N.D.
light
acetate; Light intensity 38 uM
N.D.
+1.4
N.D.
+0.6
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+2.5
N.D.
-0.4
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+3.2
N.D.
-0.1
N.D.
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