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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3757 and Rru_A3758 are separated by 21 nucleotides
Rru_A3758 and Rru_A3759 are separated by 12 nucleotides
Rru_A3759 and Rru_A3760 are separated by 204 nucleotides
Rru_A3760 and Rru_A3761 are separated by 136 nucleotides
Rru_A3757: Rru_A3757 - Excisionase/Xis, DNA-binding (NCBI), at 4,309,293 to 4,309,469
_A3757
Rru_A3758: Rru_A3758 - hypothetical protein (NCBI), at 4,309,491 to 4,309,595
_A3758
Rru_A3759: Rru_A3759 - hypothetical protein (NCBI), at 4,309,608 to 4,310,132
_A3759
Rru_A3760: Rru_A3760 - regulatory protein GntR (NCBI), at 4,310,337 to 4,311,725
_A3760
Rru_A3761: Rru_A3761 - hypothetical protein (NCBI), at 4,311,862 to 4,313,154
_A3761
Group
Condition
Rru
_A3757
Rru
_A3758
Rru
_A3759
Rru
_A3760
Rru
_A3761
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
-0.7
-1.3
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.5
-0.2
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.3
-0.2
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.3
-0.3
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-0.3
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.4
+0.1
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.4
+0.1
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-0.4
-0.0
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.5
+0.3
-0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+0.1
-0.4
+0.0
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.6
-0.6
-0.1
light
acetate; Light intensity 38 uM
N.D.
N.D.
+0.2
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.1
-0.3
+0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.1
-0.2
+0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.2
-0.1
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
+0.3
-0.3
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.5
-0.0
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.2
-0.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-0.3
+0.3
+0.1
light
acetate; Light intensity 75 uM
N.D.
N.D.
-0.2
+0.1
+0.3
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
N.D.
+0.3
-0.1
+0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
-0.1
+0.3
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.6
-0.1
-0.2
carbon source
Succinate (C)_noKan
N.D.
N.D.
+0.4
-0.1
+0.1
light
acetate; Light intensity 38 uM
N.D.
N.D.
-0.2
+0.2
+0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.3
-0.1
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
+0.3
+0.1
+0.1
light
acetate; Light intensity 18 uM
N.D.
N.D.
-0.2
+0.4
+0.4
light
acetate; Light intensity 18 uM
N.D.
N.D.
+0.2
+0.3
+0.1
light
acetate; Light intensity 9 uM
N.D.
N.D.
+0.2
+0.3
+0.2
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