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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3752 and Rru_A3753 are separated by 126 nucleotides
Rru_A3753 and Rru_A3754 are separated by 223 nucleotides
Rru_A3754 and Rru_A3755 are separated by 141 nucleotides
Rru_A3755 and Rru_A3756 are separated by 210 nucleotides
Rru_A3752: Rru_A3752 - Protein of unknown function DUF302 (NCBI), at 4,300,668 to 4,301,099
_A3752
Rru_A3753: Rru_A3753 - hypothetical protein (NCBI), at 4,301,226 to 4,305,737
_A3753
Rru_A3754: Rru_A3754 - hypothetical protein (NCBI), at 4,305,961 to 4,306,215
_A3754
Rru_A3755: Rru_A3755 - Heat shock protein Hsp20 (NCBI), at 4,306,357 to 4,306,905
_A3755
Rru_A3756: Rru_A3756 - PAS/PAC Sensor Hybrid Histidine Kinase (NCBI), at 4,307,116 to 4,309,134
_A3756
Group
Condition
Rru
_A3752
Rru
_A3753
Rru
_A3754
Rru
_A3755
Rru
_A3756
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.1
+0.1
-0.4
-0.6
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.0
-0.0
-0.4
-1.4
-0.2
light
Succinic Acid; Light intensity 75 uM
-0.0
-0.2
-1.6
+0.1
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.5
+0.1
+0.6
-1.3
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.0
-0.1
-1.0
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.7
+0.0
-0.3
-0.2
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
-0.1
+0.2
-0.8
+0.1
light
Succinic Acid; Light intensity 18 uM
-0.1
+0.2
-0.2
-0.4
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.6
+0.0
+0.6
-1.0
+0.0
light
acetate; Light intensity 75 uM
+0.2
-0.3
+0.1
-0.6
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
-0.1
+0.2
-0.8
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.1
+0.1
-0.5
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.0
+0.1
-0.7
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
+0.0
+0.2
-0.7
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.4
-0.0
+1.1
-1.0
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.6
+0.1
+0.5
-0.3
-0.0
light
Succinic Acid; Light intensity 150 uM
+1.2
-0.4
-0.4
-0.4
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.2
+0.1
+0.5
-0.3
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
+0.1
+0.2
-0.6
+0.4
light
Succinic Acid; Light intensity 18 uM
+0.6
-0.3
-0.9
+0.0
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.3
-0.0
+0.1
-0.2
+0.5
light
Succinic Acid; Light intensity 38 uM
+0.4
-0.1
+0.4
-0.4
-0.2
light
Succinic Acid; Light intensity 75 uM
-0.4
-0.1
+0.6
-0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.2
+0.7
-0.8
+0.2
light
Succinic Acid; Light intensity 150 uM
+0.4
-0.2
+0.3
+0.0
-0.2
light
acetate; Light intensity 18 uM
+0.1
-0.4
+0.7
+0.3
-0.2
light
acetate; Light intensity 38 uM
+1.5
-0.2
-0.2
+0.3
-0.2
carbon source
Valeric 25 mM; anaerobic
+0.5
-0.1
+0.1
+0.4
+0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.7
-0.1
+0.2
+0.4
+0.3
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.5
+0.2
+1.5
+2.2
+0.1
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