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Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3743 and Rru_A3744 are separated by 129 nucleotides
Rru_A3744 and Rru_A3745 are separated by 80 nucleotides
Rru_A3745 and Rru_A3746 are separated by 146 nucleotides
Rru_A3746 and Rru_A3747 are separated by 27 nucleotides
Rru_A3743: Rru_A3743 - hypothetical protein (NCBI), at 4,293,281 to 4,293,442
_A3743
Rru_A3744: Rru_A3744 - Predicted signal-transduction protein containing CBS domains (NCBI), at 4,293,572 to 4,294,018
_A3744
Rru_A3745: Rru_A3745 - hypothetical protein (NCBI), at 4,294,099 to 4,294,671
_A3745
Rru_A3746: Rru_A3746 - Ribosomal protein L25 (NCBI), at 4,294,818 to 4,295,450
_A3746
Rru_A3747: Rru_A3747 - Aminoacyl-tRNA hydrolase (NCBI), at 4,295,478 to 4,296,209
_A3747
Group
Condition
Rru
_A3743
Rru
_A3744
Rru
_A3745
Rru
_A3746
Rru
_A3747
light
Succinic Acid; Light intensity 18 uM
-0.8
-0.4
-0.3
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.2
-0.3
+0.2
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.1
+0.0
-0.1
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.6
-0.4
-0.1
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.9
+0.0
-0.2
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.9
-0.3
+0.1
N.D.
N.D.
carbon source
Succinate (C)
-0.8
+0.0
+0.3
N.D.
N.D.
light
Succinic Acid; Light intensity 38 uM
-0.3
+0.4
-0.5
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+1.5
-0.4
-1.2
N.D.
N.D.
light
acetate; Light intensity 18 uM
-0.5
+0.9
-0.4
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
-0.5
+0.3
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
-0.3
-0.2
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.0
+0.7
-0.5
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
-0.8
+1.0
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.7
+1.0
N.D.
N.D.
light
acetate; Light intensity 9 uM
+0.3
+0.6
-0.6
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
-0.3
-0.1
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
+1.0
-0.8
+0.3
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.4
+0.6
+0.5
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
+1.1
+0.1
-0.5
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.9
-0.5
+0.5
N.D.
N.D.
light
acetate; Light intensity 38 uM
+0.2
-0.3
+1.1
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.9
+0.0
+0.1
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+1.1
-0.3
+0.3
N.D.
N.D.
light
acetate; Light intensity 75 uM
+0.2
+1.1
+0.0
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.7
+0.5
+0.1
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.4
+1.2
+0.2
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.8
-0.1
+0.4
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
+1.6
+0.2
+0.4
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.8
+0.7
+0.7
N.D.
N.D.
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