Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3677 and Rru_A3678 are separated by 129 nucleotidesRru_A3678 and Rru_A3679 are separated by 188 nucleotidesRru_A3679 and Rru_A3680 are separated by 61 nucleotidesRru_A3680 and Rru_A3681 are separated by 326 nucleotides Rru_A3677: Rru_A3677 - Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI), at 4,224,670 to 4,225,395 _A3677 Rru_A3678: Rru_A3678 - TRAP dicarboxylate transporter- DctP subunit (NCBI), at 4,225,525 to 4,226,520 _A3678 Rru_A3679: Rru_A3679 - Rod shape-determining protein RodA (NCBI), at 4,226,709 to 4,227,839 _A3679 Rru_A3680: Rru_A3680 - Integral membrane protein TerC (NCBI), at 4,227,901 to 4,228,893 _A3680 Rru_A3681: Rru_A3681 - YceI (NCBI), at 4,229,220 to 4,229,825 _A3681
Group Condition Rru_A3677 Rru_A3678 Rru_A3679 Rru_A3680 Rru_A3681
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -1.0 -0.4 N.D. -0.0 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.9 -0.3 N.D. +0.2 -0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.7 -0.2 N.D. -0.0 -0.4
carbon source Valeric 25 mM; anaerobic -1.0 -0.4 N.D. -0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.7 +0.1 N.D. -0.1 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.0 -0.5 N.D. +0.3 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.8 -0.5 N.D. +0.3 -0.1
light acetate; Light intensity 75 uM -0.1 -0.3 N.D. -0.2 -0.3
carbon source Succinate (C)_noKan -0.6 -0.4 N.D. -0.1 +0.3
light acetate; Light intensity 18 uM -0.0 -0.2 N.D. +0.1 -0.7
carbon source Valeric 25 mM; anaerobic +0.6 +0.1 N.D. -0.4 -1.1
light acetate; Light intensity 38 uM -0.4 +0.4 N.D. +0.4 -1.0
smn_rich SMN_rich_noKan -0.6 -0.4 N.D. -0.1 +0.4
carbon source Succinate (C)_noKan -0.5 -0.3 N.D. -0.1 +0.3
carbon source Hexanoic 21 mM; anaerobic +0.2 +0.2 N.D. -0.3 -0.5
carbon source Succinic Acid 31.25 mM; anaerobic +0.5 +0.8 N.D. -0.1 -1.1
light Succinic Acid; Light intensity 18 uM -0.2 +0.5 N.D. +0.1 +0.3
carbon source Hexanoic 21 mM; anaerobic +0.4 +0.4 N.D. -0.2 +0.3
light Succinic Acid; Light intensity 75 uM +0.5 +0.8 N.D. -0.2 -0.3
light Succinic Acid; Light intensity 150 uM +0.1 +0.2 N.D. -0.1 +0.7
light Succinic Acid; Light intensity 150 uM +0.5 +0.4 N.D. +0.1 -0.1
light Succinic Acid; Light intensity 18 uM +1.2 +0.9 N.D. -0.3 -0.8
carbon source Hexanoic 21 mM; anaerobic +0.7 +0.2 N.D. -0.1 +0.2
light Succinic Acid; Light intensity 75 uM +1.0 +0.9 N.D. -0.3 -0.5
carbon source Hexanoic 21 mM; anaerobic +0.5 +0.5 N.D. -0.2 +0.5
light Succinic Acid; Light intensity 38 uM +0.9 +0.9 N.D. -0.1 -0.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.9 +0.8 N.D. +0.2 -0.4
light acetate; Light intensity 18 uM -0.4 +1.0 N.D. +0.6 +0.5
carbon source Succinic Acid 31.25 mM; anaerobic +1.3 +0.6 N.D. -0.1 +0.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM +2.4 +2.7 N.D. -0.1 -0.4
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