Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3601 and Rru_A3602 overlap by 4 nucleotidesRru_A3602 and Rru_A3603 overlap by 14 nucleotidesRru_A3603 and Rru_A3604 are separated by 106 nucleotidesRru_A3604 and Rru_A3605 overlap by 4 nucleotides Rru_A3601: Rru_A3601 - Transcriptional Regulator, XRE family (NCBI), at 4,142,365 to 4,142,739 _A3601 Rru_A3602: Rru_A3602 - Smr protein/MutS2-like (NCBI), at 4,142,736 to 4,143,326 _A3602 Rru_A3603: Rru_A3603 - Protein of unknown function DUF162 (NCBI), at 4,143,313 to 4,143,987 _A3603 Rru_A3604: Rru_A3604 - hypothetical protein (NCBI), at 4,144,094 to 4,144,705 _A3604 Rru_A3605: Rru_A3605 - Iron-sulfur cluster binding protein (NCBI), at 4,144,702 to 4,146,120 _A3605
Group Condition Rru_A3601 Rru_A3602 Rru_A3603 Rru_A3604 Rru_A3605
light Succinic Acid; Light intensity 150 uM N.D. -1.9 -0.9 -0.2 +0.0
light Succinic Acid; Light intensity 150 uM N.D. -0.7 -0.5 -0.1 -0.2
light Succinic Acid; Light intensity 75 uM N.D. -0.7 -0.8 -0.1 +0.1
carbon source Hexanoic 21 mM; anaerobic N.D. -0.4 -0.8 +0.2 -0.5
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.0 -1.0 -0.4 -0.1
carbon source Hexanoic 21 mM; anaerobic N.D. +0.2 -0.4 -0.5 -0.6
carbon source Valeric 25 mM; anaerobic N.D. +0.1 -0.8 -0.2 -0.3
carbon source Valeric 25 mM; anaerobic N.D. -0.5 -0.8 -0.3 +0.4
carbon source Valeric 25 mM; anaerobic N.D. -1.2 +0.1 +0.1 -0.4
carbon source Hexanoic 21 mM; anaerobic N.D. -0.2 -0.5 -0.3 -0.3
carbon source Hexanoic 21 mM; anaerobic N.D. +0.1 -0.1 -0.3 -0.5
light acetate; Light intensity 38 uM N.D. -0.9 +0.8 -0.2 -0.4
carbon source Hexanoic 21 mM; anaerobic N.D. +0.0 -0.5 -0.5 +0.3
light acetate; Light intensity 75 uM N.D. -0.5 +0.4 -0.1 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.6 -0.8 -0.6 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.4 -0.6 -0.4 +0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. -0.3 -0.5 +0.1 +0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; high light N.D. -0.2 -0.2 +0.1 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.3 -0.3 +0.0 +0.3
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.7 +0.0 +0.1 -0.1
anaerboic nitrogen source SMN_rich_anaerobic N.D. +0.3 -0.0 +0.3 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. +0.3 +0.3 +0.1 +0.3
carbon source Succinate (C) N.D. +0.3 +0.5 +0.1 +0.1
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.5 +0.7 +0.3 -0.2
smn_rich SMN_rich N.D. +0.7 +0.3 +0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light N.D. +0.1 +0.5 +0.2 +0.4
light Succinic Acid; Light intensity 18 uM N.D. +0.8 +0.6 +0.2 +0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light N.D. +0.4 +0.5 +0.3 +0.4
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.9 +0.3 +0.1 +0.6
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. +1.5 +0.2 +0.4 -0.1
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