Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3597 and Rru_A3598 are separated by 179 nucleotidesRru_A3598 and Rru_A3599 are separated by 293 nucleotidesRru_A3599 and Rru_A3600 overlap by 4 nucleotidesRru_A3600 and Rru_A3601 are separated by 22 nucleotides Rru_A3597: Rru_A3597 - Imidazoleglycerol-phosphate dehydratase (NCBI), at 4,138,932 to 4,139,531 _A3597 Rru_A3598: Rru_A3598 - Transcriptional Regulator, XRE family (NCBI), at 4,139,711 to 4,140,181 _A3598 Rru_A3599: Rru_A3599 - 20S proteasome, A and B subunits (NCBI), at 4,140,475 to 4,141,038 _A3599 Rru_A3600: Rru_A3600 - Heat shock protein HslU (NCBI), at 4,141,035 to 4,142,342 _A3600 Rru_A3601: Rru_A3601 - Transcriptional Regulator, XRE family (NCBI), at 4,142,365 to 4,142,739 _A3601
Group Condition Rru_A3597 Rru_A3598 Rru_A3599 Rru_A3600 Rru_A3601
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. N.D. -1.8 -2.1 N.D.
light Succinic Acid; Light intensity 75 uM N.D. N.D. -2.0 -0.4 N.D.
light acetate; Light intensity 9 uM N.D. N.D. -0.9 -1.5 N.D.
light acetate; Light intensity 38 uM N.D. N.D. -1.0 -1.0 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. -1.8 -0.1 N.D.
light Succinic Acid; Light intensity 9 uM N.D. N.D. -0.8 -1.1 N.D.
light acetate; Light intensity 18 uM N.D. N.D. -0.7 -1.0 N.D.
light Succinic Acid; Light intensity 9 uM N.D. N.D. -1.0 -0.5 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. -1.4 -0.0 N.D.
light Succinic Acid; Light intensity 18 uM N.D. N.D. -0.9 -0.5 N.D.
light Succinic Acid; Light intensity 38 uM N.D. N.D. -0.9 -0.4 N.D.
carbon source Succinate (C) N.D. N.D. -0.8 -0.4 N.D.
carbon source Valeric 25 mM; anaerobic N.D. N.D. -0.6 -0.6 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. N.D. -0.8 -0.3 N.D.
carbon source Succinate (C) N.D. N.D. -0.6 -0.4 N.D.
carbon source Succinate (C) N.D. N.D. -0.6 -0.4 N.D.
carbon source Succinate (C)_noKan N.D. N.D. -0.7 -0.3 N.D.
light Succinic Acid; Light intensity 18 uM N.D. N.D. -0.6 -0.4 N.D.
carbon source Valeric 25 mM; anaerobic N.D. N.D. -0.6 -0.2 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. N.D. -1.0 +0.2 N.D.
carbon source Valeric 25 mM; anaerobic N.D. N.D. +1.0 -1.0 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. N.D. +0.5 -0.4 N.D.
light Succinic Acid; Light intensity 75 uM N.D. N.D. +0.7 -0.5 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. N.D. +1.6 -0.9 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. N.D. +0.2 +0.6 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. +1.5 -0.7 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. N.D. +0.2 +0.7 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. N.D. +0.9 +0.4 N.D.
light Succinic Acid; Light intensity 150 uM N.D. N.D. +0.9 +0.9 N.D.
light Succinic Acid; Light intensity 150 uM N.D. N.D. +0.9 +2.0 N.D.
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