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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3566 and Rru_A3567 are separated by 4 nucleotides
Rru_A3567 and Rru_A3568 are separated by 34 nucleotides
Rru_A3568 and Rru_A3569 are separated by 154 nucleotides
Rru_A3569 and Rru_A3570 are separated by 63 nucleotides
Rru_A3566: Rru_A3566 - HemY-like (NCBI), at 4,109,800 to 4,111,101
_A3566
Rru_A3567: Rru_A3567 - Uroporphyrinogen III synthase HEM4 (NCBI), at 4,111,106 to 4,113,310
_A3567
Rru_A3568: Rru_A3568 - Porphobilinogen deaminase (NCBI), at 4,113,345 to 4,114,310
_A3568
Rru_A3569: Rru_A3569 - O-sialoglycoprotein endopeptidase (NCBI), at 4,114,465 to 4,115,454
_A3569
Rru_A3570: Rru_A3570 - Protein of unknown function DUF29 (NCBI), at 4,115,518 to 4,115,961
_A3570
Group
Condition
Rru
_A3566
Rru
_A3567
Rru
_A3568
Rru
_A3569
Rru
_A3570
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
-0.7
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.3
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
-0.2
light
acetate; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.2
light
acetate; Light intensity 75 uM
N.D.
N.D.
N.D.
N.D.
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
N.D.
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.3
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.5
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
+0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
+0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
+0.8
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
+0.9
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
+1.2
light
acetate; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
+1.2
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Rru_A3568
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