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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3564 and Rru_A3565 are separated by 102 nucleotides
Rru_A3565 and Rru_A3566 are separated by 95 nucleotides
Rru_A3566 and Rru_A3567 are separated by 4 nucleotides
Rru_A3567 and Rru_A3568 are separated by 34 nucleotides
Rru_A3564: Rru_A3564 - Histidinol-phosphate phosphatase (NCBI), at 4,108,262 to 4,108,843
_A3564
Rru_A3565: Rru_A3565 - Rhomboid-like protein (NCBI), at 4,108,946 to 4,109,704
_A3565
Rru_A3566: Rru_A3566 - HemY-like (NCBI), at 4,109,800 to 4,111,101
_A3566
Rru_A3567: Rru_A3567 - Uroporphyrinogen III synthase HEM4 (NCBI), at 4,111,106 to 4,113,310
_A3567
Rru_A3568: Rru_A3568 - Porphobilinogen deaminase (NCBI), at 4,113,345 to 4,114,310
_A3568
Group
Condition
Rru
_A3564
Rru
_A3565
Rru
_A3566
Rru
_A3567
Rru
_A3568
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.5
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.2
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.2
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.1
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.1
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.1
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.1
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.1
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.2
N.D.
N.D.
N.D.
light
acetate; Light intensity 75 uM
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.2
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
+0.2
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
N.D.
N.D.
N.D.
light
acetate; Light intensity 9 uM
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.3
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 38 uM
N.D.
+0.3
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.3
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.3
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.5
N.D.
N.D.
N.D.
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