Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3533 and Rru_A3534 overlap by 8 nucleotidesRru_A3534 and Rru_A3535 are separated by 96 nucleotidesRru_A3535 and Rru_A3536 are separated by 107 nucleotidesRru_A3536 and Rru_A3537 are separated by 251 nucleotides Rru_A3533: Rru_A3533 - hypothetical protein (NCBI), at 4,064,242 to 4,065,228 _A3533 Rru_A3534: Rru_A3534 - hypothetical protein (NCBI), at 4,065,221 to 4,066,174 _A3534 Rru_A3535: Rru_A3535 - Tryptophanyl-tRNA synthetase, class Ib (NCBI), at 4,066,271 to 4,067,269 _A3535 Rru_A3536: Rru_A3536 - Nitroreductase (NCBI), at 4,067,377 to 4,068,012 _A3536 Rru_A3537: Rru_A3537 - Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI), at 4,068,264 to 4,068,560 _A3537
Group Condition Rru_A3533 Rru_A3534 Rru_A3535 Rru_A3536 Rru_A3537
carbon source Succinic Acid 31.25 mM; anaerobic -3.1 -0.2 N.D. -0.5 -2.1
carbon source Hexanoic 21 mM; anaerobic -2.1 -0.2 N.D. +0.1 -1.6
carbon source Hexanoic 21 mM; anaerobic -1.5 -0.2 N.D. +0.4 -2.3
carbon source Succinic Acid 31.25 mM; anaerobic -1.5 -0.2 N.D. +0.1 -1.1
carbon source Hexanoic 21 mM; anaerobic -1.5 -0.1 N.D. +0.3 -1.4
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.8 -0.3 N.D. -0.1 +0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.5 -0.1 N.D. -0.1 -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.6 -0.2 N.D. -0.2 -0.1
carbon source Valeric 25 mM; anaerobic -0.7 -0.2 N.D. +0.1 -1.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM -1.4 -0.1 N.D. -1.7 +1.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.6 -0.3 N.D. -0.0 +0.1
carbon source Valeric 25 mM; anaerobic -0.6 +0.1 N.D. +0.2 -1.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.3 -0.2 N.D. -1.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.4 -0.2 N.D. -1.0 +0.1
carbon source Succinate (C)_noKan -1.2 -0.1 N.D. -0.1 +0.3
carbon source Succinic Acid 31.25 mM; anaerobic -1.4 -0.2 N.D. +0.7 -0.2
smn_rich SMN_rich_noKan -1.3 +0.1 N.D. -0.1 +0.4
carbon source Succinic Acid 31.25 mM; anaerobic -2.3 +0.1 N.D. +0.3 +1.0
carbon source Hexanoic 21 mM; anaerobic -1.3 +0.1 N.D. +0.1 +0.1
carbon source Succinic Acid 31.25 mM; anaerobic -1.5 -0.0 N.D. +0.0 +0.7
carbon source Hexanoic 21 mM; anaerobic -2.1 -0.0 N.D. +0.2 +1.1
carbon source Valeric 25 mM; anaerobic -2.0 +0.0 N.D. +0.2 +1.1
smn_rich SMN_rich_noKan -1.0 -0.1 N.D. +0.3 +0.5
light acetate; Light intensity 18 uM +0.7 +0.2 N.D. -0.4 -0.6
light acetate; Light intensity 75 uM +0.8 +0.4 N.D. +0.2 -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.4 N.D. -0.3 +0.8
light Succinic Acid; Light intensity 150 uM +1.6 +0.1 N.D. -0.1 +0.2
light acetate; Light intensity 38 uM +1.1 +0.6 N.D. -0.2 +0.6
light Succinic Acid; Light intensity 18 uM -0.4 +0.1 N.D. +0.6 +1.9
light Succinic Acid; Light intensity 150 uM +2.5 +0.1 N.D. +0.3 +1.7
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