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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3521 and Rru_A3522 are separated by 54 nucleotides
Rru_A3522 and Rru_A3523 are separated by 164 nucleotides
Rru_A3523 and Rru_A3524 overlap by 4 nucleotides
Rru_A3524 and Rru_A3525 are separated by 109 nucleotides
Rru_A3521: Rru_A3521 - Ribosomal protein L35 (NCBI), at 4,053,441 to 4,053,638
_A3521
Rru_A3522: Rru_A3522 - Ribosomal protein L20 (NCBI), at 4,053,693 to 4,054,070
_A3522
Rru_A3523: Rru_A3523 - Phenylalanyl-tRNA synthetase, alpha subunit (NCBI), at 4,054,235 to 4,055,311
_A3523
Rru_A3524: Rru_A3524 - phenylalanyl-tRNA synthetase, beta subunit (NCBI), at 4,055,308 to 4,057,710
_A3524
Rru_A3525: Rru_A3525 - hypothetical protein (NCBI), at 4,057,820 to 4,058,458
_A3525
Group
Condition
Rru
_A3521
Rru
_A3522
Rru
_A3523
Rru
_A3524
Rru
_A3525
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
N.D.
N.D.
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.4
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
-0.4
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
N.D.
N.D.
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
-0.3
light
acetate; Light intensity 75 uM
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Succinate (C)_noKan
N.D.
N.D.
N.D.
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
N.D.
N.D.
-0.2
smn_rich
SMN_rich
N.D.
N.D.
N.D.
N.D.
-0.2
smn_rich
SMN_rich
N.D.
N.D.
N.D.
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
N.D.
N.D.
-0.2
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
N.D.
N.D.
-0.2
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.2
anaerboic nitrogen source
Low light with N2
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.3
light
acetate; Light intensity 9 uM
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
N.D.
N.D.
+0.5
light
acetate; Light intensity 38 uM
N.D.
N.D.
N.D.
N.D.
+0.6
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