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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3489 and Rru_A3490 are separated by 51 nucleotides
Rru_A3490 and Rru_A3491 are separated by 336 nucleotides
Rru_A3491 and Rru_A3492 are separated by 145 nucleotides
Rru_A3492 and Rru_A3493 are separated by 286 nucleotides
Rru_A3489: Rru_A3489 - hypothetical protein (NCBI), at 4,015,087 to 4,016,529
_A3489
Rru_A3490: Rru_A3490 - Metallophosphoesterase (NCBI), at 4,016,581 to 4,017,432
_A3490
Rru_A3491: Rru_A3491 - hypothetical protein (NCBI), at 4,017,769 to 4,017,987
_A3491
Rru_A3492: Rru_A3492 - Periplasmic Sensor Hybrid Histidine Kinase (NCBI), at 4,018,133 to 4,021,258
_A3492
Rru_A3493: Rru_A3493 - Hpt domain protein (NCBI), at 4,021,545 to 4,021,904
_A3493
Group
Condition
Rru
_A3489
Rru
_A3490
Rru
_A3491
Rru
_A3492
Rru
_A3493
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
-0.1
-0.7
-1.7
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.3
+0.5
-1.0
-1.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.4
-0.2
-0.5
-1.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
-0.6
+0.1
-0.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
-0.5
+0.2
-0.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.2
-0.3
-1.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
-0.1
-0.3
-1.0
N.D.
smn_rich
SMN_rich_noKan
-0.1
-0.2
-0.4
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.0
-0.3
-0.4
N.D.
light
acetate; Light intensity 38 uM
-0.5
+0.3
-0.2
-0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.4
-0.3
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.7
-0.1
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.1
-0.3
-0.1
-0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.7
-0.1
+0.1
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.2
+0.5
-0.7
-0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.4
+0.1
-0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
-0.4
-0.2
-0.0
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.0
-0.4
+0.4
-0.2
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.0
+0.6
-0.5
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.1
+0.1
+0.2
-0.5
N.D.
anaerboic nitrogen source
Low light with ammonium chloride
+0.3
+0.2
-0.1
-0.4
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.0
+0.1
+0.3
-0.4
N.D.
light
acetate; Light intensity 75 uM
-0.1
-0.1
+0.6
-0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.2
+0.5
-0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.2
+0.5
-0.3
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.3
+0.5
+0.2
-0.2
N.D.
light
acetate; Light intensity 9 uM
-0.2
+0.0
+0.6
-0.2
N.D.
light
acetate; Light intensity 18 uM
-0.2
-0.0
+1.0
-0.5
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.2
+0.1
+0.6
-0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.2
+0.5
-0.0
N.D.
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