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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3464 and Rru_A3465 are separated by 16 nucleotides
Rru_A3465 and Rru_A3466 are separated by 94 nucleotides
Rru_A3466 and Rru_A3467 are separated by 13 nucleotides
Rru_A3467 and Rru_A3468 are separated by 178 nucleotides
Rru_A3464: Rru_A3464 - transcriptional regulator with PAS/PAC domain (NCBI), at 3,989,302 to 3,989,826
_A3464
Rru_A3465: Rru_A3465 - chemotaxis sensory transducer (NCBI), at 3,989,843 to 3,991,102
_A3465
Rru_A3466: Rru_A3466 - Ornithine aminotransferase (NCBI), at 3,991,197 to 3,992,444
_A3466
Rru_A3467: Rru_A3467 - Amidinotransferase (NCBI), at 3,992,458 to 3,993,342
_A3467
Rru_A3468: Rru_A3468 - Transcriptional Regulator, AsnC family (NCBI), at 3,993,521 to 3,993,946
_A3468
Group
Condition
Rru
_A3464
Rru
_A3465
Rru
_A3466
Rru
_A3467
Rru
_A3468
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
-0.3
-0.1
-0.0
-1.6
light
Succinic Acid; Light intensity 18 uM
-0.8
-0.0
-0.3
-0.2
-1.2
light
Succinic Acid; Light intensity 75 uM
-0.5
-0.2
-0.9
+0.0
-0.5
light
Succinic Acid; Light intensity 9 uM
-0.6
-0.1
-0.5
-0.2
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.0
-0.0
-0.2
-1.4
carbon source
Hexanoic 21 mM; anaerobic
-0.2
+0.0
-0.1
-0.1
-1.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
+0.2
+0.0
-0.7
-1.0
carbon source
Valeric 25 mM; anaerobic
-0.0
+0.2
-0.1
-0.5
-1.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.1
+0.2
-0.8
-0.7
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.6
+0.4
+0.1
-1.2
-1.2
light
Succinic Acid; Light intensity 75 uM
-0.3
-0.0
-0.6
+0.1
-0.5
light
acetate; Light intensity 18 uM
+0.4
-0.2
-0.2
-0.2
-0.8
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.1
-1.1
+0.2
-0.0
light
acetate; Light intensity 38 uM
-0.6
+0.2
-0.8
+0.5
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.2
+0.1
-0.7
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
+0.4
+0.0
-0.7
-0.4
carbon source
Valeric 25 mM; anaerobic
-0.4
+0.0
+0.5
-0.3
-0.3
light
Succinic Acid; Light intensity 38 uM
+0.4
+0.4
-0.4
-0.1
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.1
-0.2
-0.2
+0.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
-0.4
+0.1
+0.7
+0.5
light
Succinic Acid; Light intensity 150 uM
+0.1
+0.3
-0.7
+0.6
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-0.4
+0.1
+0.6
+0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
-0.0
-0.1
+0.3
+0.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.5
+0.8
-0.1
-0.3
+0.4
light
Succinic Acid; Light intensity 150 uM
-0.0
+0.0
-0.9
+1.2
+1.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.3
+0.2
+0.3
+0.1
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.4
+0.1
+0.5
+0.4
+1.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.5
+0.4
+0.7
+0.3
+0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.8
+0.6
+0.6
-0.2
+1.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
+0.8
+0.6
+0.3
+1.0
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