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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3429 and Rru_A3430 are separated by 171 nucleotides
Rru_A3430 and Rru_A3431 are separated by 13 nucleotides
Rru_A3431 and Rru_A3432 are separated by 4 nucleotides
Rru_A3432 and Rru_A3433 are separated by 171 nucleotides
Rru_A3429: Rru_A3429 - hypothetical protein (NCBI), at 3,946,899 to 3,947,471
_A3429
Rru_A3430: Rru_A3430 - Acetyl-CoA carboxylase carboxyl transferase, beta subunit (NCBI), at 3,947,643 to 3,948,767
_A3430
Rru_A3431: Rru_A3431 - Folylpolyglutamate synthetase (NCBI), at 3,948,781 to 3,950,088
_A3431
Rru_A3432: Rru_A3432 - hypothetical protein (NCBI), at 3,950,093 to 3,951,616
_A3432
Rru_A3433: Rru_A3433 - Thioredoxin (NCBI), at 3,951,788 to 3,952,102
_A3433
Group
Condition
Rru
_A3429
Rru
_A3430
Rru
_A3431
Rru
_A3432
Rru
_A3433
light
Succinic Acid; Light intensity 18 uM
-0.6
N.D.
N.D.
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.3
N.D.
N.D.
-0.2
N.D.
light
Succinic Acid; Light intensity 38 uM
-0.2
N.D.
N.D.
-0.1
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.4
N.D.
N.D.
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
N.D.
N.D.
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
N.D.
N.D.
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.0
N.D.
N.D.
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
N.D.
N.D.
+0.2
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.2
N.D.
N.D.
+0.2
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.3
N.D.
N.D.
+0.4
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.2
N.D.
N.D.
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
N.D.
N.D.
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
N.D.
N.D.
+0.3
N.D.
smn_rich
SMN_rich_noKan
+0.0
N.D.
N.D.
+0.2
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.1
N.D.
N.D.
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
N.D.
N.D.
+0.1
N.D.
smn_rich
SMN_rich_noKan
+0.1
N.D.
N.D.
+0.1
N.D.
anaerboic nitrogen source
Low light with ammonium chloride
+0.2
N.D.
N.D.
+0.0
N.D.
light
acetate; Light intensity 18 uM
+0.2
N.D.
N.D.
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
N.D.
N.D.
+0.3
N.D.
carbon source
Succinate (C)_noKan
+0.1
N.D.
N.D.
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.2
N.D.
N.D.
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.4
N.D.
N.D.
-0.0
N.D.
light
acetate; Light intensity 75 uM
+0.3
N.D.
N.D.
+0.1
N.D.
light
acetate; Light intensity 18 uM
+0.3
N.D.
N.D.
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
N.D.
N.D.
+0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
N.D.
N.D.
+0.3
N.D.
light
acetate; Light intensity 38 uM
+0.6
N.D.
N.D.
+0.2
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.5
N.D.
N.D.
+0.4
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.3
N.D.
N.D.
+0.8
N.D.
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