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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3426 and Rru_A3427 are separated by 174 nucleotides
Rru_A3427 and Rru_A3428 overlap by 4 nucleotides
Rru_A3428 and Rru_A3429 are separated by 172 nucleotides
Rru_A3429 and Rru_A3430 are separated by 171 nucleotides
Rru_A3426: Rru_A3426 - hypothetical protein (NCBI), at 3,943,221 to 3,944,513
_A3426
Rru_A3427: Rru_A3427 - Tryptophan synthase, beta chain (NCBI), at 3,944,688 to 3,945,914
_A3427
Rru_A3428: Rru_A3428 - Tryptophan synthase (NCBI), at 3,945,911 to 3,946,726
_A3428
Rru_A3429: Rru_A3429 - hypothetical protein (NCBI), at 3,946,899 to 3,947,471
_A3429
Rru_A3430: Rru_A3430 - Acetyl-CoA carboxylase carboxyl transferase, beta subunit (NCBI), at 3,947,643 to 3,948,767
_A3430
Group
Condition
Rru
_A3426
Rru
_A3427
Rru
_A3428
Rru
_A3429
Rru
_A3430
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-4.6
-5.2
+0.1
N.D.
carbon source
Succinate (C)
+0.2
-3.6
-5.8
+0.0
N.D.
carbon source
Succinate (C)
+0.2
-3.7
-5.7
-0.0
N.D.
carbon source
Succinate (C)_noKan
+0.3
-3.8
-5.5
+0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-4.5
-4.6
+0.0
N.D.
carbon source
Succinate (C)_noKan
+0.3
-3.7
-5.4
+0.1
N.D.
carbon source
Succinate (C)
+0.2
-3.6
-5.2
-0.0
N.D.
carbon source
Succinate (C)_noKan
+0.3
-3.6
-5.0
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-3.8
-4.0
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.0
-3.6
-4.0
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-3.2
-3.6
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-2.9
-3.5
-0.1
N.D.
light
acetate; Light intensity 9 uM
-1.1
-2.7
-3.2
+0.1
N.D.
light
Succinic Acid; Light intensity 75 uM
-1.2
-2.5
-2.6
-0.4
N.D.
light
acetate; Light intensity 18 uM
-0.7
-2.5
-3.5
+0.3
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.4
-3.3
-2.9
-0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.5
-2.6
-4.0
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.7
-2.6
-4.0
+0.1
N.D.
light
Succinic Acid; Light intensity 38 uM
+0.1
-2.9
-2.6
-0.2
N.D.
light
acetate; Light intensity 38 uM
-1.1
-1.8
-2.7
+0.1
N.D.
light
Succinic Acid; Light intensity 75 uM
-1.0
-1.9
-2.2
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
-2.6
-2.5
-0.2
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.1
-2.6
-2.9
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.4
-2.7
-3.3
+0.4
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.3
-2.8
-3.1
+0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
-2.5
-2.4
-0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
-2.2
-2.7
-0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-2.0
-3.0
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-2.4
-2.5
+0.2
N.D.
light
acetate; Light intensity 75 uM
+1.3
-2.4
-2.5
+0.3
N.D.
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