Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3421 and Rru_A3422 are separated by 138 nucleotidesRru_A3422 and Rru_A3423 are separated by 24 nucleotidesRru_A3423 and Rru_A3424 are separated by 99 nucleotidesRru_A3424 and Rru_A3425 overlap by 4 nucleotides Rru_A3421: Rru_A3421 - Protein of unknown function DUF461 (NCBI), at 3,938,560 to 3,939,135 _A3421 Rru_A3422: Rru_A3422 - Two component Transcriptional regulator, Winged helix family (NCBI), at 3,939,274 to 3,939,999 _A3422 Rru_A3423: Rru_A3423 - Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI), at 3,940,024 to 3,941,718 _A3423 Rru_A3424: Rru_A3424 - Orotidine-5'-phosphate decarboxylase (NCBI), at 3,941,818 to 3,942,561 _A3424 Rru_A3425: Rru_A3425 - Phosphoribosylanthranilate isomerase (NCBI), at 3,942,558 to 3,943,214 _A3425
Group Condition Rru_A3421 Rru_A3422 Rru_A3423 Rru_A3424 Rru_A3425
carbon source Succinate (C)_noKan N.D. N.D. N.D. -2.7 -7.4
carbon source Succinate (C) N.D. N.D. N.D. -4.4 -4.8
carbon source Succinate (C) N.D. N.D. N.D. -4.2 -4.9
carbon source Succinate (C)_noKan N.D. N.D. N.D. -3.4 -5.7
carbon source Succinate (C) N.D. N.D. N.D. -3.5 -5.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. N.D. N.D. -2.5 -6.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. N.D. N.D. -2.0 -6.2
carbon source Succinate (C)_noKan N.D. N.D. N.D. -2.6 -5.5
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. N.D. N.D. -1.6 -5.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. N.D. N.D. -2.1 -4.2
light Succinic Acid; Light intensity 38 uM N.D. N.D. N.D. -2.2 -3.9
carbon source Valeric 25 mM; anaerobic N.D. N.D. N.D. -1.6 -4.3
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. N.D. N.D. -1.8 -3.8
carbon source Valeric 25 mM; anaerobic N.D. N.D. N.D. -1.2 -4.1
carbon source Valeric 25 mM; anaerobic N.D. N.D. N.D. -1.2 -4.0
light Succinic Acid; Light intensity 75 uM N.D. N.D. N.D. -1.8 -3.0
light acetate; Light intensity 9 uM N.D. N.D. N.D. -0.6 -3.9
light Succinic Acid; Light intensity 18 uM N.D. N.D. N.D. -1.3 -3.1
carbon source Hexanoic 21 mM; anaerobic N.D. N.D. N.D. -1.5 -2.8
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. N.D. -2.1 -2.1
carbon source Valeric 25 mM; anaerobic N.D. N.D. N.D. -0.8 -3.3
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. N.D. -1.8 -2.2
carbon source Hexanoic 21 mM; anaerobic N.D. N.D. N.D. -1.2 -2.6
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. N.D. -1.4 -2.2
light Succinic Acid; Light intensity 18 uM N.D. N.D. N.D. -1.2 -2.3
light Succinic Acid; Light intensity 9 uM N.D. N.D. N.D. -0.5 -2.7
light acetate; Light intensity 38 uM N.D. N.D. N.D. -0.7 -2.5
light acetate; Light intensity 18 uM N.D. N.D. N.D. +0.8 -4.0
carbon source Succinic Acid 31.25 mM; anaerobic N.D. N.D. N.D. -0.9 -2.2
light acetate; Light intensity 75 uM N.D. N.D. N.D. +1.1 -2.9
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