Fitness for 5 genes in Rhodospirillum rubrum S1H

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntRru_A3386 and Rru_A3387 are separated by 34 nucleotidesRru_A3387 and Rru_A3388 overlap by 4 nucleotidesRru_A3388 and Rru_A3389 are separated by 24 nucleotidesRru_A3389 and Rru_A3390 are separated by 4 nucleotides Rru_A3386: Rru_A3386 - BioY protein (NCBI), at 3,903,275 to 3,903,823 _A3386 Rru_A3387: Rru_A3387 - Acetyl-CoA C-acetyltransferase (NCBI), at 3,903,858 to 3,905,018 _A3387 Rru_A3388: Rru_A3388 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI), at 3,905,015 to 3,905,938 _A3388 Rru_A3389: Rru_A3389 - Protein of unknown function DUF403 (NCBI), at 3,905,963 to 3,907,000 _A3389 Rru_A3390: Rru_A3390 - hypothetical protein (NCBI), at 3,907,005 to 3,908,420 _A3390
Group Condition Rru_A3386 Rru_A3387 Rru_A3388 Rru_A3389 Rru_A3390
carbon source Hexanoic 21 mM; anaerobic -1.5 N.D. -0.5 -0.0 +0.2
carbon source Valeric 25 mM; anaerobic -1.7 N.D. +0.2 +0.2 +0.2
light Succinic Acid; Light intensity 18 uM -1.1 N.D. -0.1 +0.3 +0.2
carbon source Hexanoic 21 mM; anaerobic -0.7 N.D. -0.0 +0.1 +0.1
carbon source Hexanoic 21 mM; anaerobic -1.1 N.D. +0.6 +0.2 +0.1
light acetate; Light intensity 38 uM -0.4 N.D. +0.5 -0.1 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 N.D. +0.5 -0.2 -0.2
light Succinic Acid; Light intensity 18 uM -0.0 N.D. +0.6 -0.2 -0.4
carbon source Succinic Acid 31.25 mM; anaerobic -0.5 N.D. +0.5 +0.2 +0.2
light acetate; Light intensity 18 uM +0.5 N.D. +0.4 -0.1 -0.2
light acetate; Light intensity 9 uM +0.5 N.D. +0.4 -0.1 +0.0
carbon source Succinic Acid 31.25 mM; anaerobic +1.0 N.D. -0.2 -0.0 +0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.3 N.D. +0.4 +0.1 +0.2
light acetate; Light intensity 75 uM +0.7 N.D. +0.4 +0.1 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.8 N.D. -0.2 +0.2 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 N.D. +0.6 +0.2 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 N.D. +0.5 +0.2 +0.4
light acetate; Light intensity 18 uM +0.9 N.D. +0.2 +0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.3 N.D. +0.5 +0.3 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.3 N.D. +0.7 +0.2 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.0 N.D. +0.9 +0.3 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.4 N.D. +0.6 +0.3 +0.4
light Succinic Acid; Light intensity 150 uM +1.8 N.D. -0.2 +0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.4 N.D. +0.5 +0.5 +0.5
light acetate; Light intensity 38 uM +1.4 N.D. +0.5 +0.1 -0.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM +1.4 N.D. +0.2 +0.3 +0.1
light Succinic Acid; Light intensity 150 uM +2.7 N.D. -0.5 -0.0 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.6 N.D. +0.6 +0.6 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +1.8 N.D. +0.1 +0.1 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +1.9 N.D. +0.2 +0.2 +0.3
remove
Rru_A3386
plot		 remove
Rru_A3387
plot		 remove
Rru_A3388		 remove
Rru_A3389
plot		 remove
Rru_A3390
plot