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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3283 and Rru_A3284 are separated by 181 nucleotides
Rru_A3284 and Rru_A3285 are separated by 119 nucleotides
Rru_A3285 and Rru_A3286 are separated by 451 nucleotides
Rru_A3286 and Rru_A3287 are separated by 14 nucleotides
Rru_A3283: Rru_A3283 - Phasin (NCBI), at 3,780,097 to 3,780,573
_A3283
Rru_A3284: Rru_A3284 - Secretion chaperone CsaA (NCBI), at 3,780,755 to 3,781,090
_A3284
Rru_A3285: Rru_A3285 - Response regulator receiver domain protein (CheY) (NCBI), at 3,781,210 to 3,782,007
_A3285
Rru_A3286: Rru_A3286 - hypothetical protein (NCBI), at 3,782,459 to 3,782,908
_A3286
Rru_A3287: Rru_A3287 - Sigma-24 (FecI) (NCBI), at 3,782,923 to 3,783,759
_A3287
Group
Condition
Rru
_A3283
Rru
_A3284
Rru
_A3285
Rru
_A3286
Rru
_A3287
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.1
-3.3
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.3
-2.9
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.5
-2.3
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.1
-2.5
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.0
-2.5
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.4
-2.1
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
-0.6
-1.7
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
-1.7
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.2
-1.8
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.6
-2.1
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
-1.0
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.0
-1.2
N.D.
N.D.
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
-0.2
-0.9
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.0
-1.0
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.1
-0.8
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.6
-0.1
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.1
-0.6
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.3
+0.5
N.D.
N.D.
carbon source
Succinate (C)
N.D.
+0.2
+0.4
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.6
-0.0
N.D.
N.D.
anaerboic nitrogen source
Low light with N2
N.D.
-0.0
+0.7
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.2
+0.5
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
+1.1
N.D.
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.6
+0.3
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.2
+0.9
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.2
+1.3
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.8
+0.7
N.D.
N.D.
light
acetate; Light intensity 75 uM
N.D.
+0.2
+1.6
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.0
+2.5
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.1
+2.9
N.D.
N.D.
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