Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3235 and Rru_A3236 are separated by 40 nucleotidesRru_A3236 and Rru_A3237 are separated by 12 nucleotidesRru_A3237 and Rru_A3238 overlap by 17 nucleotidesRru_A3238 and Rru_A3239 are separated by 158 nucleotides Rru_A3235: Rru_A3235 - Secretion protein HlyD (NCBI), at 3,730,807 to 3,731,982 _A3235 Rru_A3236: Rru_A3236 - hypothetical protein (NCBI), at 3,732,023 to 3,733,975 _A3236 Rru_A3237: Rru_A3237 - RND efflux system, outer membrane lipoprotein, NodT (NCBI), at 3,733,988 to 3,735,373 _A3237 Rru_A3238: Rru_A3238 - hypothetical protein (NCBI), at 3,735,357 to 3,735,599 _A3238 Rru_A3239: Rru_A3239 - Plasmid stabilization system (NCBI), at 3,735,758 to 3,736,048 _A3239
Group Condition Rru_A3235 Rru_A3236 Rru_A3237 Rru_A3238 Rru_A3239
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.7 +0.1 -0.6 -0.8 -0.3
light Succinic Acid; Light intensity 18 uM -1.2 -0.0 +0.3 -0.6 +0.1
carbon source Valeric 25 mM; anaerobic -0.0 -0.3 -0.3 +0.5 -0.9
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.0 -0.1 -0.0 -0.2 -0.5
light Succinic Acid; Light intensity 75 uM -0.2 -0.3 +0.0 -0.4 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.3 +0.1 +0.3 -0.3 -0.3
carbon source Hexanoic 21 mM; anaerobic -0.2 -0.1 -0.2 +0.3 -0.5
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.4 -0.1 +0.2 -0.3
light acetate; Light intensity 18 uM +0.3 -0.1 +0.0 -0.0 -0.7
light acetate; Light intensity 38 uM -0.2 -0.2 -0.0 -0.3 +0.5
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 +0.0 -0.1 +0.7 -1.1
anaerboic nitrogen source Low light with ammonium chloride -0.0 -0.0 -0.0 -0.5 +0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 +0.1 +0.3 -0.3 -0.3
carbon source Hexanoic 21 mM; anaerobic +0.2 +0.0 +0.2 -0.7 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.1 -0.1 +0.1 +0.3 -0.4
carbon source Succinate (C)_noKan -0.1 -0.1 -0.1 -0.1 +0.5
carbon source Valeric 25 mM; anaerobic +0.1 +0.1 +0.2 -0.5 +0.3
smn_rich SMN_rich +0.0 -0.2 -0.1 -0.1 +0.6
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.1 +0.2 +0.2 +0.1 -0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.3 -0.3 -0.0 +0.1
carbon source Hexanoic 21 mM; anaerobic -0.4 -0.0 +0.0 -0.0 +0.9
carbon source Valeric 25 mM; anaerobic -0.0 +0.1 +0.2 -0.2 +0.4
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 +0.0 +0.4 -0.8 +0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.3 +0.1 +0.4 -0.2
light Succinic Acid; Light intensity 18 uM +1.0 -0.1 -0.1 -0.1 +0.1
light Succinic Acid; Light intensity 150 uM -0.2 -0.1 +0.0 +0.1 +1.0
carbon source Succinic Acid 31.25 mM; anaerobic +0.0 +0.5 +0.1 -0.5 +0.9
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 +0.5 +0.2 +0.5 -0.2
carbon source Hexanoic 21 mM; anaerobic -0.0 +0.2 -0.0 +0.0 +1.1
light acetate; Light intensity 18 uM +0.1 -0.1 +0.0 -0.2 +1.5
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