Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3231 and Rru_A3232 are separated by 77 nucleotidesRru_A3232 and Rru_A3233 are separated by 79 nucleotidesRru_A3233 and Rru_A3234 overlap by 4 nucleotidesRru_A3234 and Rru_A3235 are separated by 177 nucleotides Rru_A3231: Rru_A3231 - ThiJ/PfpI (NCBI), at 3,725,576 to 3,726,259 _A3231 Rru_A3232: Rru_A3232 - Thermostable carboxypeptidase 1 (NCBI), at 3,726,337 to 3,727,875 _A3232 Rru_A3233: Rru_A3233 - Threonine synthase (NCBI), at 3,727,955 to 3,729,367 _A3233 Rru_A3234: Rru_A3234 - processing peptidase (NCBI), at 3,729,364 to 3,730,629 _A3234 Rru_A3235: Rru_A3235 - Secretion protein HlyD (NCBI), at 3,730,807 to 3,731,982 _A3235
Group Condition Rru_A3231 Rru_A3232 Rru_A3233 Rru_A3234 Rru_A3235
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.4 N.D. -0.5 +0.0
light Succinic Acid; Light intensity 18 uM +0.2 -0.0 N.D. +0.3 -1.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 -0.1 N.D. -0.4 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 -0.1 N.D. -0.4 -0.1
light Succinic Acid; Light intensity 75 uM +0.0 -0.4 N.D. -0.1 -0.0
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.4 N.D. -0.3 -0.2
carbon source Hexanoic 21 mM; anaerobic +0.2 +0.2 N.D. -0.6 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.1 N.D. +0.1 -0.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.1 -0.0 N.D. +0.6 -0.7
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 -0.2 N.D. +0.2 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.0 -0.2 N.D. -0.2 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.3 N.D. -0.2 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 +0.0 N.D. +0.1 -0.3
light acetate; Light intensity 75 uM -0.2 +0.4 N.D. -0.3 +0.0
light acetate; Light intensity 18 uM -0.1 +0.2 N.D. -0.2 +0.1
light Succinic Acid; Light intensity 75 uM +0.2 -0.2 N.D. +0.2 -0.2
smn_rich SMN_rich -0.0 +0.3 N.D. -0.2 +0.0
carbon source Valeric 25 mM; anaerobic +0.3 +0.0 N.D. -0.1 -0.0
light Succinic Acid; Light intensity 38 uM +0.2 -0.1 N.D. -0.1 +0.2
light acetate; Light intensity 18 uM -0.2 +0.0 N.D. +0.2 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.1 +0.2 N.D. +0.2 -0.1
light acetate; Light intensity 38 uM -0.1 -0.0 N.D. +0.2 +0.2
light Succinic Acid; Light intensity 9 uM +0.1 -0.0 N.D. +0.3 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 -0.0 N.D. +0.2 +0.1
light Succinic Acid; Light intensity 150 uM +0.1 +0.2 N.D. -0.2 +0.5
carbon source Valeric 25 mM; anaerobic +0.3 +0.3 N.D. +0.0 +0.1
light Succinic Acid; Light intensity 150 uM +0.2 +0.8 N.D. -0.1 -0.2
light Succinic Acid; Light intensity 18 uM -0.0 -0.1 N.D. -0.0 +1.0
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.2 N.D. +0.2 +0.3
light acetate; Light intensity 38 uM +0.1 +0.9 N.D. +0.6 -0.2
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