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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3180 and Rru_A3181 are separated by 28 nucleotides
Rru_A3181 and Rru_A3182 are separated by 166 nucleotides
Rru_A3182 and Rru_A3183 are separated by 2 nucleotides
Rru_A3183 and Rru_A3184 are separated by 11 nucleotides
Rru_A3180: Rru_A3180 - Metal dependent phosphohydrolase, HD region (NCBI), at 3,671,580 to 3,672,764
_A3180
Rru_A3181: Rru_A3181 - hypothetical protein (NCBI), at 3,672,793 to 3,673,134
_A3181
Rru_A3182: Rru_A3182 - Auxin Efflux Carrier (NCBI), at 3,673,301 to 3,674,227
_A3182
Rru_A3183: Rru_A3183 - diheme cytochrome c (NCBI), at 3,674,230 to 3,674,718
_A3183
Rru_A3184: Rru_A3184 - hypothetical protein (NCBI), at 3,674,730 to 3,675,626
_A3184
Group
Condition
Rru
_A3180
Rru
_A3181
Rru
_A3182
Rru
_A3183
Rru
_A3184
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.3
-0.2
-0.5
-0.4
light
Succinic Acid; Light intensity 150 uM
-0.2
-0.2
-0.3
-0.1
-0.5
light
Succinic Acid; Light intensity 75 uM
-0.1
-0.4
-0.3
+0.1
-0.5
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.2
-0.1
-0.1
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
-0.1
-0.1
+0.3
-1.1
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.5
-0.5
+0.7
-0.4
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.6
-0.9
-0.1
+0.4
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.5
-0.1
+0.3
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.6
-0.5
-0.9
+1.5
light
Succinic Acid; Light intensity 150 uM
-0.0
-0.4
-0.3
+0.7
-0.5
light
Succinic Acid; Light intensity 18 uM
-0.2
+0.0
+0.2
-0.9
+0.3
light
acetate; Light intensity 38 uM
-0.2
-0.7
-0.3
+1.7
-1.0
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.7
+0.1
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.9
-0.5
-0.8
+1.9
light
Succinic Acid; Light intensity 9 uM
+0.1
-0.4
-0.3
+0.1
+0.1
light
Succinic Acid; Light intensity 75 uM
-0.0
-0.3
-0.2
+0.3
-0.2
light
acetate; Light intensity 18 uM
+0.4
-0.0
-0.2
-0.6
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.3
-0.3
-0.6
+1.1
light
acetate; Light intensity 9 uM
-0.2
-0.4
+0.1
+0.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.2
-0.4
-0.8
+1.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.5
+0.2
-0.1
+0.3
light
acetate; Light intensity 38 uM
-0.2
-0.2
-0.0
+0.5
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.3
-0.0
-0.4
+1.0
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.4
-0.2
+0.3
-0.0
smn_rich
SMN_rich_noKan
+0.1
+0.1
+0.1
+0.2
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.0
-0.3
-0.1
-0.3
+1.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
-0.1
-0.3
+0.2
+0.5
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.3
-0.2
+0.1
+0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.0
-0.6
-0.1
+0.0
+1.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
+0.2
-0.1
+0.0
+0.9
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