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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3155 and Rru_A3156 are separated by 58 nucleotides
Rru_A3156 and Rru_A3157 are separated by 148 nucleotides
Rru_A3157 and Rru_A3158 are separated by 182 nucleotides
Rru_A3158 and Rru_A3159 are separated by 66 nucleotides
Rru_A3155: Rru_A3155 - hypothetical protein (NCBI), at 3,644,722 to 3,646,263
_A3155
Rru_A3156: Rru_A3156 - von Willebrand factor, type A (NCBI), at 3,646,322 to 3,648,049
_A3156
Rru_A3157: Rru_A3157 - hypothetical protein (NCBI), at 3,648,198 to 3,649,415
_A3157
Rru_A3158: Rru_A3158 - hypothetical protein (NCBI), at 3,649,598 to 3,650,047
_A3158
Rru_A3159: Rru_A3159 - General substrate transporter (NCBI), at 3,650,114 to 3,651,400
_A3159
Group
Condition
Rru
_A3155
Rru
_A3156
Rru
_A3157
Rru
_A3158
Rru
_A3159
carbon source
Hexanoic 21 mM; anaerobic
-0.5
+0.8
-1.4
-1.1
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
-0.8
+0.4
-0.9
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.2
+0.8
-1.6
-0.3
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
+0.8
-1.0
-0.6
-0.4
carbon source
Valeric 25 mM; anaerobic
-0.6
-0.5
+0.1
-0.5
-0.1
light
Succinic Acid; Light intensity 9 uM
-0.6
+0.0
-0.3
-0.5
+0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.6
-0.7
-0.1
-0.3
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
+0.0
-0.4
-0.2
-0.2
light
acetate; Light intensity 38 uM
+0.4
-0.3
-0.2
-0.4
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.1
+0.0
-0.5
-0.2
carbon source
Valeric 25 mM; anaerobic
+0.4
-0.4
-0.1
-0.0
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.3
-0.1
-0.2
+0.2
+0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.7
-0.6
-1.0
+0.7
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+1.0
-0.6
-0.3
-0.2
-0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.3
+0.3
+0.0
-0.3
light
Succinic Acid; Light intensity 75 uM
+0.7
-0.1
-0.4
-0.4
-0.1
light
Succinic Acid; Light intensity 38 uM
+0.3
-0.4
+0.0
-0.2
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.1
+0.1
-0.4
+0.2
+0.1
light
Succinic Acid; Light intensity 18 uM
-0.6
-0.1
-0.3
+1.0
-0.0
light
acetate; Light intensity 18 uM
+0.8
+0.2
-0.3
-0.5
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.3
-0.5
-0.0
+0.3
+0.2
carbon source
Valeric 25 mM; anaerobic
+0.8
-0.4
+0.2
-0.1
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.2
-0.2
+0.2
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.5
-0.2
+0.2
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.8
-0.1
-0.2
+0.8
-0.1
light
acetate; Light intensity 38 uM
+1.4
+1.7
-2.3
+0.3
+0.5
light
acetate; Light intensity 18 uM
+1.1
+1.0
-0.3
+0.3
-0.2
light
acetate; Light intensity 75 uM
+1.2
+0.9
-0.4
-0.0
+0.2
light
Succinic Acid; Light intensity 150 uM
+2.3
+1.8
-0.5
-0.1
+0.2
light
Succinic Acid; Light intensity 150 uM
+3.2
+3.7
-0.7
+0.3
+0.1
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