Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A3134 and Rru_A3135 overlap by 4 nucleotidesRru_A3135 and Rru_A3136 are separated by 239 nucleotidesRru_A3136 and Rru_A3137 are separated by 194 nucleotidesRru_A3137 and Rru_A3138 are separated by 18 nucleotides Rru_A3134: Rru_A3134 - AMP-dependent synthetase and ligase (NCBI), at 3,613,334 to 3,614,950 _A3134 Rru_A3135: Rru_A3135 - Orn/DAP/Arg decarboxylase 2 (NCBI), at 3,614,947 to 3,616,161 _A3135 Rru_A3136: Rru_A3136 - putative partition-related protein (NCBI), at 3,616,401 to 3,617,030 _A3136 Rru_A3137: Rru_A3137 - Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI), at 3,617,225 to 3,619,792 _A3137 Rru_A3138: Rru_A3138 - hypothetical protein (NCBI), at 3,619,811 to 3,621,070 _A3138
Group Condition Rru_A3134 Rru_A3135 Rru_A3136 Rru_A3137 Rru_A3138
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.1 -2.1 -0.0 -0.3 -0.2
light Succinic Acid; Light intensity 18 uM +0.1 -0.3 -0.6 -0.1 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 +0.1 -1.0 +0.0 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 -0.2 -0.1 -0.0 -0.6
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.4 -0.1 -0.2 -0.0 -0.2
carbon source Hexanoic 21 mM; anaerobic +0.0 +0.1 -0.3 -0.0 -0.3
carbon source Valeric 25 mM; anaerobic -0.2 -0.9 +0.4 +0.0 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 -0.5 -0.1 -0.4 +0.5
light Succinic Acid; Light intensity 75 uM -0.1 -0.3 -0.1 +0.0 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 +0.0 +0.1 +0.1 -0.3
carbon source Hexanoic 21 mM; anaerobic -0.2 +0.3 -0.3 -0.1 +0.1
light acetate; Light intensity 18 uM -0.1 -0.2 +0.3 -0.0 -0.1
light Succinic Acid; Light intensity 75 uM +0.0 -0.3 +0.1 -0.1 +0.2
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.3 -0.1 -0.0 -0.3
smn_rich SMN_rich_noKan +0.2 +0.1 -0.0 +0.0 -0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 +0.2 +0.2 -0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.0 +0.5 -0.1 -0.1 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 -0.2 +0.0 -0.3 +0.6
smn_rich SMN_rich +0.2 +0.3 -0.2 +0.0 +0.1
anaerboic nitrogen source Low light with N2 +0.2 +0.1 +0.2 +0.0 -0.2
carbon source Hexanoic 21 mM; anaerobic +0.2 +0.0 +0.4 -0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.2 +0.7 +0.0 -0.1 -0.1
light Succinic Acid; Light intensity 150 uM -0.2 +0.0 +0.3 -0.1 +0.5
light acetate; Light intensity 75 uM -0.1 +0.2 +0.3 -0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 +0.5 +0.2 +0.0 +0.1
light acetate; Light intensity 38 uM -0.5 +0.4 -0.3 +0.5 +0.7
light Succinic Acid; Light intensity 18 uM +0.2 +0.2 +0.1 +0.2 +0.3
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.4 +0.5 -0.0 +0.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.1 +0.5 +0.1 +0.3
light Succinic Acid; Light intensity 150 uM -0.2 +1.5 +0.4 -0.0 +0.5
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