Fitness for 5 genes in Rhodospirillum rubrum S1H

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntRru_A3088 and Rru_A3089 are separated by 154 nucleotidesRru_A3089 and Rru_A3090 are separated by 21 nucleotidesRru_A3090 and Rru_A3091 overlap by 4 nucleotidesRru_A3091 and Rru_A3092 are separated by 14 nucleotides Rru_A3088: Rru_A3088 - hypothetical protein (NCBI), at 3,552,944 to 3,553,288 _A3088 Rru_A3089: Rru_A3089 - hypothetical protein (NCBI), at 3,553,443 to 3,553,634 _A3089 Rru_A3090: Rru_A3090 - Glycosyl transferase, family 2 (NCBI), at 3,553,656 to 3,554,588 _A3090 Rru_A3091: Rru_A3091 - Glycosyl transferase, group 1 (NCBI), at 3,554,585 to 3,556,897 _A3091 Rru_A3092: Rru_A3092 - Parallel beta-helix repeat (NCBI), at 3,556,912 to 3,558,387 _A3092
Group Condition Rru_A3088 Rru_A3089 Rru_A3090 Rru_A3091 Rru_A3092
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.7 -1.0 -0.2 -0.3 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -1.0 -0.1 -0.2 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.3 -1.0 -0.2 -0.2 -0.0
smn_rich SMN_rich +0.0 -0.8 -0.3 +0.1 -0.0
carbon source Succinate (C) +0.1 -0.9 -0.0 +0.0 +0.1
carbon source Valeric 25 mM; anaerobic -0.9 -0.0 -0.0 +0.3 +0.0
carbon source Succinic Acid 31.25 mM; anaerobic -0.5 -0.3 +0.0 +0.3 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.2 -0.1 -0.4 -0.2 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 -0.3 -0.3 -0.0 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.4 -0.2 -0.3 -0.2 -0.1
carbon source Succinate (C)_noKan -0.1 -0.6 +0.2 +0.0 +0.2
carbon source Succinate (C) +0.2 -0.6 +0.2 +0.0 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.3 -0.7 -0.1 +0.1 +0.1
light Succinic Acid; Light intensity 75 uM -0.4 +0.3 -0.1 -0.1 -0.0
smn_rich SMN_rich_noKan +0.3 -0.6 +0.0 +0.1 +0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.4 -0.1 -0.1 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.6 -0.5 -0.2 -0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.7 -0.4 -0.1 -0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.5 -0.1 -0.1 -0.2 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 -0.1 -0.3 +0.1 -0.0
light acetate; Light intensity 18 uM -0.9 +0.1 +0.6 +0.1 +0.1
light Succinic Acid; Light intensity 18 uM -0.8 +1.1 +0.2 -0.7 +0.4
light acetate; Light intensity 75 uM -0.2 +0.5 +0.2 -0.2 +0.1
light Succinic Acid; Light intensity 18 uM +0.6 -0.8 +0.0 +0.6 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.3 +0.2 -0.2 -0.0 +0.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.1 +1.2 +0.2 -1.0 +0.0
light Succinic Acid; Light intensity 150 uM +0.3 +0.6 -0.2 +0.1 +0.0
carbon source Valeric 25 mM; anaerobic +0.4 +0.4 -0.0 +0.3 -0.1
light acetate; Light intensity 38 uM -0.0 +1.2 +0.5 -0.4 +0.5
light Succinic Acid; Light intensity 150 uM +0.8 +2.4 +0.1 -0.4 -0.0
remove
Rru_A3088
plot
remove
Rru_A3089
plot
remove
Rru_A3090
remove
Rru_A3091
plot
remove
Rru_A3092
plot