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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3074 and Rru_A3075 are separated by 8 nucleotides
Rru_A3075 and Rru_A3076 are separated by 282 nucleotides
Rru_A3076 and Rru_A3077 are separated by 231 nucleotides
Rru_A3077 and Rru_A3078 are separated by 1 nucleotides
Rru_A3074: Rru_A3074 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like (NCBI), at 3,539,235 to 3,540,776
_A3074
Rru_A3075: Rru_A3075 - permease YjgP/YjgQ (NCBI), at 3,540,785 to 3,541,885
_A3075
Rru_A3076: Rru_A3076 - Cobalamin adenosyltransferase (NCBI), at 3,542,168 to 3,542,863
_A3076
Rru_A3077: Rru_A3077 - Electron transfer flavoprotein beta-subunit (NCBI), at 3,543,095 to 3,543,844
_A3077
Rru_A3078: Rru_A3078 - Electron transfer flavoprotein (NCBI), at 3,543,846 to 3,544,781
_A3078
Group
Condition
Rru
_A3074
Rru
_A3075
Rru
_A3076
Rru
_A3077
Rru
_A3078
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.6
N.D.
+0.1
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.7
N.D.
+0.2
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.4
N.D.
-0.0
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.4
N.D.
+0.0
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.1
N.D.
-0.3
N.D.
N.D.
light
Succinic Acid; Light intensity 38 uM
-0.4
N.D.
+0.1
N.D.
N.D.
light
acetate; Light intensity 75 uM
-0.4
N.D.
+0.1
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.5
N.D.
+0.3
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
N.D.
+0.3
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
N.D.
-0.3
N.D.
N.D.
carbon source
Succinate (C)_noKan
+0.1
N.D.
-0.3
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
N.D.
-0.5
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.6
N.D.
+0.5
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
N.D.
-0.4
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.2
N.D.
+0.1
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
N.D.
+0.3
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.4
N.D.
+0.3
N.D.
N.D.
anaerboic nitrogen source
Low light with N2
+0.2
N.D.
-0.1
N.D.
N.D.
smn_rich
SMN_rich
-0.1
N.D.
+0.2
N.D.
N.D.
light
acetate; Light intensity 18 uM
-0.0
N.D.
+0.3
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.3
N.D.
+0.6
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.3
N.D.
+0.6
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
N.D.
+0.2
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.4
N.D.
+0.0
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.6
N.D.
-0.2
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.1
N.D.
+0.4
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
N.D.
+0.2
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.6
N.D.
+0.0
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.5
N.D.
+0.1
N.D.
N.D.
light
acetate; Light intensity 38 uM
+1.3
N.D.
+0.5
N.D.
N.D.
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