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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3045 and Rru_A3046 are separated by 99 nucleotides
Rru_A3046 and Rru_A3047 are separated by 132 nucleotides
Rru_A3047 and Rru_A3048 are separated by 47 nucleotides
Rru_A3048 and Rru_A3049 are separated by 0 nucleotides
Rru_A3045: Rru_A3045 - hypothetical protein (NCBI), at 3,508,544 to 3,509,131
_A3045
Rru_A3046: Rru_A3046 - Radical SAM (NCBI), at 3,509,231 to 3,510,112
_A3046
Rru_A3047: Rru_A3047 - hypothetical protein (NCBI), at 3,510,245 to 3,510,682
_A3047
Rru_A3048: Rru_A3048 - Glycine dehydrogenase (decarboxylating) (NCBI), at 3,510,730 to 3,512,244
_A3048
Rru_A3049: Rru_A3049 - Glycine dehydrogenase (decarboxylating) (NCBI), at 3,512,245 to 3,513,591
_A3049
Group
Condition
Rru
_A3045
Rru
_A3046
Rru
_A3047
Rru
_A3048
Rru
_A3049
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
-0.2
-0.2
-0.1
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.4
-0.9
+0.0
+0.1
-0.4
anaerboic nitrogen source
SMN_rich_anaerobic
-0.2
-0.1
-0.0
-0.2
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.2
+0.1
-0.3
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.8
-0.5
+0.1
+0.4
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.4
-0.8
+0.0
+0.1
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.1
+0.1
-0.2
-0.2
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.1
-0.5
-0.0
-0.1
anaerboic nitrogen source
Low light with ammonium chloride
+0.1
-0.1
+0.0
-0.4
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.5
+0.2
+0.1
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.2
-0.3
+0.3
-0.0
+0.1
anaerboic nitrogen source
Low light with N2
+0.1
-0.1
+0.3
-0.2
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.2
+0.1
-0.4
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.0
-0.9
+0.2
+0.6
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
+0.1
-0.4
+0.0
+0.3
light
acetate; Light intensity 38 uM
+0.3
+0.1
+0.2
-0.2
-0.3
smn_rich
SMN_rich_noKan
+0.1
-0.1
+0.4
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.3
-0.1
+0.3
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.3
-0.5
+0.3
+0.5
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.2
-0.2
+0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.4
+0.3
+0.5
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.0
-0.3
+0.4
+0.4
light
Succinic Acid; Light intensity 38 uM
+0.2
+0.5
+0.2
-0.0
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.4
+0.1
-0.1
+0.3
light
Succinic Acid; Light intensity 150 uM
+0.3
+0.3
-0.1
+0.2
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.5
-0.0
+0.1
+0.3
light
Succinic Acid; Light intensity 150 uM
+0.4
-0.0
+0.2
+0.7
-0.0
light
acetate; Light intensity 18 uM
+0.1
+0.4
+0.3
+0.0
+0.3
light
acetate; Light intensity 75 uM
+0.1
+0.2
-0.3
+0.8
+0.9
light
acetate; Light intensity 38 uM
+1.1
-0.1
-0.1
+0.9
+1.5
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Rru_A3047
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