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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A3027 and Rru_A3028 are separated by 386 nucleotides
Rru_A3028 and Rru_A3029 are separated by 37 nucleotides
Rru_A3029 and Rru_A3030 are separated by 53 nucleotides
Rru_A3030 and Rru_A3031 are separated by 123 nucleotides
Rru_A3027: Rru_A3027 - Sulfotransferase (NCBI), at 3,483,878 to 3,484,744
_A3027
Rru_A3028: Rru_A3028 - Asparagine synthase (NCBI), at 3,485,131 to 3,486,909
_A3028
Rru_A3029: Rru_A3029 - Glucosamine-fructose-6-phosphate aminotransferase, isomerising (NCBI), at 3,486,947 to 3,488,770
_A3029
Rru_A3030: Rru_A3030 - UDP-N-acetylglucosamine pyrophosphorylase (NCBI), at 3,488,824 to 3,490,254
_A3030
Rru_A3031: Rru_A3031 - 2-phosphoglycolate phosphatase (NCBI), at 3,490,378 to 3,491,148
_A3031
Group
Condition
Rru
_A3027
Rru
_A3028
Rru
_A3029
Rru
_A3030
Rru
_A3031
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.4
N.D.
N.D.
-0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.4
+0.1
N.D.
N.D.
-0.4
light
Succinic Acid; Light intensity 75 uM
-0.2
-0.2
N.D.
N.D.
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.2
N.D.
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.1
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 18 uM
+0.2
-0.4
N.D.
N.D.
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.2
+0.2
N.D.
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
+0.1
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.1
N.D.
N.D.
+0.3
light
Succinic Acid; Light intensity 38 uM
+0.4
-0.2
N.D.
N.D.
-0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.0
+0.4
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 150 uM
+0.4
-0.3
N.D.
N.D.
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.3
+0.1
N.D.
N.D.
+0.4
light
acetate; Light intensity 38 uM
+0.3
-0.2
N.D.
N.D.
+0.1
light
acetate; Light intensity 75 uM
+0.5
-0.3
N.D.
N.D.
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.5
+0.2
N.D.
N.D.
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.5
+0.0
N.D.
N.D.
+0.8
light
acetate; Light intensity 18 uM
+0.3
-0.0
N.D.
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.2
N.D.
N.D.
+0.5
light
Succinic Acid; Light intensity 75 uM
+0.6
+0.2
N.D.
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
+0.2
N.D.
N.D.
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.5
N.D.
N.D.
+0.4
light
Succinic Acid; Light intensity 9 uM
+0.4
+0.2
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.2
+0.1
N.D.
N.D.
+0.5
light
acetate; Light intensity 18 uM
+0.4
+0.3
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.2
N.D.
N.D.
+0.9
light
Succinic Acid; Light intensity 150 uM
+0.8
+0.4
N.D.
N.D.
+0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.7
+0.5
N.D.
N.D.
+0.3
light
Succinic Acid; Light intensity 18 uM
+0.7
+0.5
N.D.
N.D.
+0.3
light
acetate; Light intensity 38 uM
+1.9
+0.1
N.D.
N.D.
+0.6
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