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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2981 and Rru_A2982 are separated by 69 nucleotides
Rru_A2982 and Rru_A2983 are separated by 181 nucleotides
Rru_A2983 and Rru_A2984 are separated by 202 nucleotides
Rru_A2984 and Rru_A2985 are separated by 137 nucleotides
Rru_A2981: Rru_A2981 - 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide (NCBI), at 3,432,473 to 3,433,426
_A2981
Rru_A2982: Rru_A2982 - O-methyltransferase, family 2 (NCBI), at 3,433,496 to 3,434,686
_A2982
Rru_A2983: Rru_A2983 - Polyprenyl synthetase (NCBI), at 3,434,868 to 3,435,737
_A2983
Rru_A2984: Rru_A2984 - CrtD protein (NCBI), at 3,435,940 to 3,437,451
_A2984
Rru_A2985: Rru_A2985 - Hydroxyneurosporene synthase (NCBI), at 3,437,589 to 3,438,350
_A2985
Group
Condition
Rru
_A2981
Rru
_A2982
Rru
_A2983
Rru
_A2984
Rru
_A2985
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-4.4
-3.0
-3.9
-0.9
-1.9
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-3.7
-2.8
-4.5
-0.9
-2.0
carbon source
Valeric 25 mM; anaerobic
-4.4
-2.5
-4.2
-0.0
-0.5
carbon source
Hexanoic 21 mM; anaerobic
-2.6
-1.5
-4.1
-0.9
-1.0
carbon source
Hexanoic 21 mM; anaerobic
-2.3
-1.5
-4.0
-0.7
-1.2
carbon source
Valeric 25 mM; anaerobic
-2.8
-1.7
-4.1
+0.0
-0.8
carbon source
Succinic Acid 31.25 mM; anaerobic
-4.3
-0.0
-4.2
-0.4
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-3.5
-1.1
-4.0
-0.1
-0.1
carbon source
Valeric 25 mM; anaerobic
-3.2
-1.1
-4.0
+0.1
-0.5
carbon source
Hexanoic 21 mM; anaerobic
-2.4
-1.3
-2.6
-0.9
-0.9
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-2.4
-0.7
-2.1
-1.5
-1.2
carbon source
Valeric 25 mM; anaerobic
-2.5
-2.0
-2.4
-0.4
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-2.4
-1.2
-2.2
-0.7
-0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-2.6
-1.1
-1.9
-0.8
-0.8
carbon source
Succinic Acid 31.25 mM; anaerobic
-3.1
+0.2
-4.1
-0.1
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.6
+0.1
-3.9
-0.6
+0.3
light
Succinic Acid; Light intensity 18 uM
-0.9
-1.3
-3.4
-0.6
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-2.1
-1.6
-0.9
-0.7
-1.1
light
acetate; Light intensity 9 uM
-1.4
-2.3
-0.5
-0.4
-1.7
light
acetate; Light intensity 18 uM
-0.6
-2.1
-0.0
-0.3
-2.2
light
acetate; Light intensity 38 uM
-1.4
-1.8
-0.6
-0.0
-1.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.6
+0.0
-2.3
-0.2
+0.5
light
Succinic Acid; Light intensity 9 uM
-1.6
-1.5
-0.7
-0.0
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.2
-0.2
-0.8
-0.0
-0.0
light
acetate; Light intensity 75 uM
-0.2
-1.0
+0.4
-0.6
-1.8
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.9
-0.7
-0.4
+0.2
-0.7
light
acetate; Light intensity 38 uM
+1.1
-0.4
-0.8
-0.3
-0.8
light
Succinic Acid; Light intensity 150 uM
+0.9
-0.2
+1.1
-0.3
-0.8
light
Succinic Acid; Light intensity 18 uM
-0.9
-0.6
+3.0
+0.1
+0.0
light
Succinic Acid; Light intensity 150 uM
+2.6
+0.1
-0.1
-0.2
-0.4
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