Fitness for 5 genes in Rhodospirillum rubrum S1H

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntRru_A2903 and Rru_A2904 are separated by 1582 nucleotidesRru_A2904 and Rru_A2905 are separated by 627 nucleotidesRru_A2905 and Rru_A2906 are separated by 188 nucleotidesRru_A2906 and Rru_A2907 are separated by 543 nucleotides Rru_A2903: Rru_A2903 - Deoxyribodipyrimidine photolyase (NCBI), at 3,345,275 to 3,346,711 _A2903 Rru_A2904: Rru_A2904 - transposase (NCBI), at 3,348,294 to 3,348,701 _A2904 Rru_A2905: Rru_A2905 - Protein of unknown function DUF6, transmembrane (NCBI), at 3,349,329 to 3,350,306 _A2905 Rru_A2906: Rru_A2906 - Transcriptional Regulator, AsnC family (NCBI), at 3,350,495 to 3,351,001 _A2906 Rru_A2907: Rru_A2907 - Anti-Sigma-factor antagonist (STAS) domain protein (NCBI), at 3,351,545 to 3,351,880 _A2907
Group Condition Rru_A2903 Rru_A2904 Rru_A2905 Rru_A2906 Rru_A2907
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.2 +0.3 +0.1 +0.1 -4.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 -0.7 -0.4 -0.4 +0.0
light Succinic Acid; Light intensity 75 uM +0.0 -0.4 +0.1 +0.3 -1.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.3 -0.6 -0.3 -0.4 +0.0
smn_rich SMN_rich +0.2 +0.2 -0.2 +0.0 -1.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.2 +0.0 -0.0 -1.0
light Succinic Acid; Light intensity 18 uM -0.1 -0.4 +0.3 -0.2 -0.7
light acetate; Light intensity 38 uM -0.1 -0.1 +0.1 +0.1 -1.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 -0.2 +0.0 -0.0 -0.7
light acetate; Light intensity 18 uM +0.0 -0.2 +0.1 +0.2 -1.0
smn_rich SMN_rich +0.1 -0.1 -0.2 -0.1 -0.7
carbon source Hexanoic 21 mM; anaerobic -0.1 -0.2 -0.1 +0.5 -0.6
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.0 -0.0 +0.8 -1.3
carbon source Valeric 25 mM; anaerobic +0.2 -0.3 +0.0 +0.5 -1.0
carbon source Valeric 25 mM; anaerobic +0.2 -0.4 -0.0 +0.1 -0.4
carbon source Succinate (C)_noKan +0.1 +0.1 -0.1 +0.2 -0.7
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 -0.1 +0.1 +0.4 -1.0
carbon source Valeric 25 mM; anaerobic -0.2 +0.1 +0.1 +0.2 -0.5
carbon source Hexanoic 21 mM; anaerobic +0.4 +0.4 +0.3 -0.0 -1.0
carbon source Valeric 25 mM; anaerobic +0.4 +0.2 +0.3 -0.0 -0.6
light Succinic Acid; Light intensity 150 uM +0.8 +0.2 -0.1 -0.3 -0.5
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.3 +0.3 +0.4 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.0 -0.3 +0.1 +0.0 +0.7
light acetate; Light intensity 75 uM -0.1 +0.1 +0.1 -0.0 +0.7
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.3 -0.1 +0.5 +0.1
light acetate; Light intensity 38 uM +0.9 -0.1 +0.4 +0.9 -1.1
light Succinic Acid; Light intensity 18 uM +0.3 +0.4 -0.3 +0.4 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.6 +0.4 +0.1 -0.4 +0.3
anaerboic nitrogen source SMN_rich_anaerobic +0.2 +0.0 -0.1 -0.1 +1.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.1 +0.2 +0.6 +0.6
remove
Rru_A2903
plot		 remove
Rru_A2904
plot		 remove
Rru_A2905		 remove
Rru_A2906
plot		 remove
Rru_A2907
plot