Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2865 and Rru_A2866 are separated by 102 nucleotidesRru_A2866 and Rru_A2867 are separated by 529 nucleotidesRru_A2867 and Rru_A2868 are separated by 119 nucleotidesRru_A2868 and Rru_A2869 are separated by 156 nucleotides Rru_A2865: Rru_A2865 - Peptidase M24 (NCBI), at 3,298,299 to 3,300,332 _A2865 Rru_A2866: Rru_A2866 - Ribosomal protein L11 methyltransferase (NCBI), at 3,300,435 to 3,301,328 _A2866 Rru_A2867: Rru_A2867 - Ornithine cyclodeaminase (NCBI), at 3,301,858 to 3,302,820 _A2867 Rru_A2868: Rru_A2868 - Putative diguanylate cyclase (GGDEF domain) (NCBI), at 3,302,940 to 3,304,607 _A2868 Rru_A2869: Rru_A2869 - Exopolysaccharide synthesis, ExoD (NCBI), at 3,304,764 to 3,305,426 _A2869
Group Condition Rru_A2865 Rru_A2866 Rru_A2867 Rru_A2868 Rru_A2869
carbon source carbon source anaerobic Succinic Acid 31.25 mM -1.1 -2.3 N.D. +0.0 -2.6
carbon source Hexanoic 21 mM; anaerobic -0.7 -0.6 N.D. +0.1 -3.6
carbon source Succinic Acid 31.25 mM; anaerobic -0.5 -0.2 N.D. +0.1 -2.8
carbon source Hexanoic 21 mM; anaerobic -0.7 -0.8 N.D. -0.0 -0.3
carbon source Valeric 25 mM; anaerobic -1.3 -0.0 N.D. +0.1 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.6 -0.2 N.D. -0.2 -0.9
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.3 -0.9 N.D. -0.1 -0.4
smn_rich SMN_rich_noKan -0.3 +0.2 N.D. +0.0 -1.6
carbon source Hexanoic 21 mM; anaerobic -1.1 -0.0 N.D. -0.2 -0.1
light acetate; Light intensity 18 uM -0.5 -1.4 N.D. -0.1 +0.7
carbon source Hexanoic 21 mM; anaerobic -0.5 +0.2 N.D. -0.1 -0.9
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.2 -0.2 N.D. -0.1 +0.4
carbon source Valeric 25 mM; anaerobic -1.4 -0.3 N.D. -0.1 +0.7
light acetate; Light intensity 9 uM -0.4 -0.8 N.D. +0.1 +0.1
light Succinic Acid; Light intensity 75 uM -0.5 -0.6 N.D. -0.2 +0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.0 -0.1 N.D. -0.0 +0.4
carbon source Succinate (C) -0.6 -0.6 N.D. -0.1 +0.5
light Succinic Acid; Light intensity 18 uM -0.3 -1.0 N.D. +0.2 +0.5
smn_rich SMN_rich -1.1 -0.3 N.D. +0.1 +0.8
carbon source Valeric 25 mM; anaerobic -1.5 -0.1 N.D. -0.1 +1.2
smn_rich SMN_rich_noKan -1.0 +0.0 N.D. +0.0 +0.5
carbon source Succinate (C) -0.7 -0.3 N.D. +0.1 +0.4
carbon source Succinate (C)_noKan -0.9 +0.0 N.D. +0.0 +0.5
carbon source Succinic Acid 31.25 mM; anaerobic -0.7 -0.1 N.D. -0.1 +0.7
light acetate; Light intensity 75 uM +0.1 -0.5 N.D. -0.3 +1.0
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.5 N.D. +0.1 +0.8
light acetate; Light intensity 18 uM +0.4 -0.1 N.D. -0.2 +1.0
light acetate; Light intensity 38 uM +0.7 +0.9 N.D. -0.2 +1.3
light Succinic Acid; Light intensity 150 uM +1.0 +0.7 N.D. -0.2 +1.7
light Succinic Acid; Light intensity 150 uM +2.0 +1.4 N.D. -0.4 +2.4
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