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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2843 and Rru_A2844 are separated by 31 nucleotides
Rru_A2844 and Rru_A2845 are separated by 132 nucleotides
Rru_A2845 and Rru_A2846 are separated by 154 nucleotides
Rru_A2846 and Rru_A2847 are separated by 100 nucleotides
Rru_A2843: Rru_A2843 - hypothetical protein (NCBI), at 3,274,276 to 3,275,061
_A2843
Rru_A2844: Rru_A2844 - Flageller protein FlgA (NCBI), at 3,275,093 to 3,276,175
_A2844
Rru_A2845: Rru_A2845 - Flagellar L-ring protein (NCBI), at 3,276,308 to 3,277,075
_A2845
Rru_A2846: Rru_A2846 - hypothetical protein (NCBI), at 3,277,230 to 3,277,586
_A2846
Rru_A2847: Rru_A2847 - Transcriptional regulators, TraR/DksA family (NCBI), at 3,277,687 to 3,278,103
_A2847
Group
Condition
Rru
_A2843
Rru
_A2844
Rru
_A2845
Rru
_A2846
Rru
_A2847
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.3
-0.3
-0.6
-3.7
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.3
+0.5
-1.1
-3.8
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.6
+0.1
-0.6
-3.7
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.3
-0.1
-0.7
-3.7
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.0
-0.1
-0.2
-3.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.1
+0.0
-0.3
-3.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.1
+0.1
-0.6
-3.1
carbon source
Valeric 25 mM; anaerobic
-0.1
-0.1
-0.1
+0.7
-3.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.2
-0.1
-0.5
-2.4
carbon source
Valeric 25 mM; anaerobic
+0.0
-0.1
+0.4
+0.5
-3.8
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.1
+0.0
+0.8
-3.7
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.3
+0.3
+0.1
-3.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
-0.2
+0.1
+0.2
-2.8
carbon source
Valeric 25 mM; anaerobic
+0.0
+0.1
+0.6
+0.3
-3.1
carbon source
Succinate (C)_noKan
-0.1
+0.1
-0.1
-0.4
-1.5
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.1
+0.0
+0.2
+0.5
-2.7
smn_rich
SMN_rich_noKan
+0.1
+0.1
+0.1
+0.1
-2.0
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.3
+0.3
-1.2
-0.4
carbon source
Succinate (C)
-0.0
+0.3
-0.1
+0.8
-2.5
carbon source
Succinate (C)
-0.0
+0.1
+0.3
-0.0
-1.8
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.0
+0.7
-0.0
-1.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.3
-0.1
+0.1
+0.6
-2.2
carbon source
Succinate (C)
-0.0
+0.0
+0.3
+0.3
-1.5
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.7
-0.9
+0.4
+0.5
light
Succinic Acid; Light intensity 18 uM
-0.0
+0.6
+1.2
+0.3
-1.0
light
acetate; Light intensity 75 uM
-0.2
-0.1
-0.5
+1.0
+1.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
+0.5
-0.1
+0.8
+0.8
light
acetate; Light intensity 38 uM
-0.2
+1.2
-0.2
+2.1
+0.7
light
Succinic Acid; Light intensity 150 uM
+0.0
-0.0
-0.2
+2.3
+1.7
light
Succinic Acid; Light intensity 150 uM
-0.3
-0.2
+0.3
+4.2
+1.7
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