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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2834 and Rru_A2835 are separated by 16 nucleotides
Rru_A2835 and Rru_A2836 are separated by 184 nucleotides
Rru_A2836 and Rru_A2837 are separated by 284 nucleotides
Rru_A2837 and Rru_A2838 are separated by 167 nucleotides
Rru_A2834: Rru_A2834 - hypothetical protein (NCBI), at 3,267,314 to 3,267,565
_A2834
Rru_A2835: Rru_A2835 - hypothetical protein (NCBI), at 3,267,582 to 3,268,088
_A2835
Rru_A2836: Rru_A2836 - hypothetical protein (NCBI), at 3,268,273 to 3,269,052
_A2836
Rru_A2837: Rru_A2837 - Response regulator receiver domain protein (CheY) (NCBI), at 3,269,337 to 3,269,726
_A2837
Rru_A2838: Rru_A2838 - hypothetical protein (NCBI), at 3,269,894 to 3,270,610
_A2838
Group
Condition
Rru
_A2834
Rru
_A2835
Rru
_A2836
Rru
_A2837
Rru
_A2838
light
Succinic Acid; Light intensity 18 uM
N.D.
-1.3
-0.9
-0.8
+0.3
light
acetate; Light intensity 9 uM
N.D.
-0.8
-0.1
-1.1
+0.1
smn_rich
SMN_rich
N.D.
-0.8
-0.1
-0.4
-0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
-0.6
-0.4
-0.1
light
acetate; Light intensity 18 uM
N.D.
-0.2
-0.1
-1.2
+0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.4
-0.5
+0.3
-0.4
light
Succinic Acid; Light intensity 9 uM
N.D.
-0.7
+0.1
-0.4
+0.0
light
acetate; Light intensity 38 uM
N.D.
-0.4
+0.2
-0.7
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.5
-0.4
+0.4
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.4
+0.5
-1.2
-0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.2
+0.5
-0.6
-0.5
smn_rich
SMN_rich
N.D.
-0.2
-0.4
+0.5
-0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.0
+0.7
-1.0
-0.0
light
acetate; Light intensity 18 uM
N.D.
+0.6
-0.4
-0.4
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.9
+0.1
+0.6
+0.5
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.4
+0.2
-0.3
+0.4
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.2
-0.2
+0.7
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.3
+0.6
+0.3
+0.1
smn_rich
SMN_rich_noKan
N.D.
+0.1
+0.1
+0.8
+0.2
anaerboic nitrogen source
SMN_rich_anaerobic
N.D.
+0.5
+0.0
+0.6
+0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.2
-0.1
+1.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.4
+0.5
+0.4
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.7
+0.5
+0.3
+0.3
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+1.4
+0.3
+0.7
-0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
+0.8
+0.4
+0.3
+0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
+0.7
+0.4
+0.7
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+1.0
+0.8
+0.2
+0.6
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.6
+0.5
+1.6
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+1.0
+0.5
+0.8
+0.7
light
Succinic Acid; Light intensity 150 uM
N.D.
+1.4
+0.5
+1.2
+0.5
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