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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2806 and Rru_A2807 are separated by 1 nucleotides
Rru_A2807 and Rru_A2808 are separated by 100 nucleotides
Rru_A2808 and Rru_A2809 are separated by 162 nucleotides
Rru_A2809 and Rru_A2810 are separated by 241 nucleotides
Rru_A2806: Rru_A2806 - Protein of unknown function DUF214 (NCBI), at 3,237,384 to 3,238,673
_A2806
Rru_A2807: Rru_A2807 - YHS (NCBI), at 3,238,675 to 3,240,144
_A2807
Rru_A2808: Rru_A2808 - periplasmic protein-probably involved in high-affinity Fe2+ transport (NCBI), at 3,240,245 to 3,240,775
_A2808
Rru_A2809: Rru_A2809 - Iron permease FTR1 (NCBI), at 3,240,938 to 3,242,920
_A2809
Rru_A2810: Rru_A2810 - Saccharopine dehydrogenase (NCBI), at 3,243,162 to 3,244,304
_A2810
Group
Condition
Rru
_A2806
Rru
_A2807
Rru
_A2808
Rru
_A2809
Rru
_A2810
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.5
-0.5
-0.1
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.3
-0.5
-0.7
+0.0
carbon source
Valeric 25 mM; anaerobic
-0.3
-0.4
-0.5
+0.1
-0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.3
-0.7
-0.2
-0.2
anaerboic nitrogen source
SMN_rich_anaerobic
-0.3
-0.2
-0.4
-0.5
+0.2
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.3
-0.8
-0.2
-0.2
light
Succinic Acid; Light intensity 18 uM
-0.0
+0.2
+0.6
-0.7
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.1
-0.5
+0.3
-0.2
light
Succinic Acid; Light intensity 9 uM
+0.2
-0.3
-0.3
+0.2
+0.0
light
acetate; Light intensity 18 uM
+0.6
+0.1
-0.4
+0.1
+0.1
light
acetate; Light intensity 75 uM
+0.5
-0.1
-0.2
+0.5
+0.0
light
acetate; Light intensity 18 uM
+0.2
+0.2
-0.3
+0.3
+0.2
light
Succinic Acid; Light intensity 75 uM
+0.5
+0.3
-0.3
+0.3
+0.1
light
Succinic Acid; Light intensity 18 uM
+0.4
+0.1
-0.4
+0.6
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
+0.5
-0.2
+0.4
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
+0.1
+0.5
+0.2
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
+0.2
+0.2
+0.1
+0.1
light
Succinic Acid; Light intensity 150 uM
+0.5
+0.0
+0.0
+0.5
+0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.6
+0.7
+0.3
+0.5
-0.5
light
acetate; Light intensity 38 uM
+1.1
+0.8
-0.1
+0.7
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
+0.7
+0.8
+0.5
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.1
+0.3
+0.9
+0.6
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.6
+0.6
+0.5
+0.6
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
+0.8
+1.1
+0.5
+0.1
light
Succinic Acid; Light intensity 150 uM
+1.4
+0.2
-0.5
+1.3
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.2
+0.5
+1.2
+0.6
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.9
+0.1
+2.1
+0.4
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+1.0
+0.0
+2.2
+0.3
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
+1.0
+1.5
+0.8
+0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
+1.2
+1.4
+0.9
+0.6
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