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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2783 and Rru_A2784 are separated by 273 nucleotides
Rru_A2784 and Rru_A2785 are separated by 41 nucleotides
Rru_A2785 and Rru_A2786 overlap by 11 nucleotides
Rru_A2786 and Rru_A2787 are separated by 17 nucleotides
Rru_A2783: Rru_A2783 - Predicted periplasmic ligand-binding sensor protein (NCBI), at 3,216,771 to 3,217,331
_A2783
Rru_A2784: Rru_A2784 - Basic membrane lipoprotein (NCBI), at 3,217,605 to 3,218,594
_A2784
Rru_A2785: Rru_A2785 - ABC transporter component (NCBI), at 3,218,636 to 3,220,171
_A2785
Rru_A2786: Rru_A2786 - inner-membrane translocator (NCBI), at 3,220,161 to 3,221,210
_A2786
Rru_A2787: Rru_A2787 - inner-membrane translocator (NCBI), at 3,221,228 to 3,222,169
_A2787
Group
Condition
Rru
_A2783
Rru
_A2784
Rru
_A2785
Rru
_A2786
Rru
_A2787
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-1.5
+0.1
+0.7
-1.2
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.0
-0.4
-0.6
-0.1
carbon source
Valeric 25 mM; anaerobic
-0.3
-0.1
-0.2
-0.4
+0.1
light
Succinic Acid; Light intensity 38 uM
-0.5
+0.1
-0.2
-0.1
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.1
-0.4
-0.3
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.3
+0.1
-0.1
-0.4
-0.1
light
Succinic Acid; Light intensity 9 uM
-0.3
+0.2
-0.2
-0.3
-0.1
light
Succinic Acid; Light intensity 18 uM
-0.6
+0.4
+0.2
-0.9
+0.2
light
acetate; Light intensity 75 uM
-0.4
+0.1
-0.2
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
+0.0
+0.2
+0.1
-0.4
light
acetate; Light intensity 38 uM
-0.2
+0.3
-0.2
-0.1
+0.0
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.1
+0.1
-0.2
-0.3
light
Succinic Acid; Light intensity 18 uM
+0.5
-0.4
-0.4
+0.6
-0.2
light
acetate; Light intensity 18 uM
-0.0
+0.1
-0.2
+0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
+0.3
+0.4
+0.0
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.3
-0.0
+0.2
+0.3
-0.4
light
Succinic Acid; Light intensity 150 uM
-0.1
+0.0
-0.0
+0.6
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
+0.4
+0.4
-0.0
-0.1
light
acetate; Light intensity 18 uM
-0.2
+0.4
+0.0
+0.3
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.5
-0.0
-0.1
+0.3
-0.0
carbon source
Valeric 25 mM; anaerobic
-0.0
-0.0
+0.1
+0.4
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.1
+0.2
+0.4
-0.0
+0.0
carbon source
Valeric 25 mM; anaerobic
+0.4
-0.0
+0.0
+0.4
-0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.4
+0.2
+0.3
-0.0
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.4
-0.1
+0.2
+0.5
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
+0.1
+0.1
+0.8
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.5
+0.3
+0.3
+0.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
+0.3
+0.6
+0.1
+0.4
light
acetate; Light intensity 38 uM
+0.2
+0.2
+1.4
+0.7
-0.4
light
Succinic Acid; Light intensity 150 uM
+0.3
-0.1
+0.3
+1.5
+0.2
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