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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2744 and Rru_A2745 overlap by 10 nucleotides
Rru_A2745 and Rru_A2746 overlap by 4 nucleotides
Rru_A2746 and Rru_A2747 are separated by 167 nucleotides
Rru_A2747 and Rru_A2748 are separated by 161 nucleotides
Rru_A2744: Rru_A2744 - hypothetical protein (NCBI), at 3,176,831 to 3,177,580
_A2744
Rru_A2745: Rru_A2745 - hypothetical protein (NCBI), at 3,177,571 to 3,178,707
_A2745
Rru_A2746: Rru_A2746 - DegT/DnrJ/EryC1/StrS aminotransferase (NCBI), at 3,178,704 to 3,179,894
_A2746
Rru_A2747: Rru_A2747 - Short-chain dehydrogenase/reductase SDR (NCBI), at 3,180,062 to 3,180,823
_A2747
Rru_A2748: Rru_A2748 - ABC transporter component (NCBI), at 3,180,985 to 3,181,680
_A2748
Group
Condition
Rru
_A2744
Rru
_A2745
Rru
_A2746
Rru
_A2747
Rru
_A2748
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
-0.2
-0.2
-0.0
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.1
-0.3
-0.2
-0.1
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
-0.1
-0.3
+0.0
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.2
+0.1
-0.3
-0.7
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.1
-0.1
-0.4
-0.5
carbon source
Succinate (C)_noKan
-0.1
-0.1
-0.1
-0.1
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.1
-0.0
-0.2
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
-0.2
-0.1
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
-0.1
-0.2
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.1
+0.1
-0.0
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.0
+0.4
-0.1
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
-0.1
-0.3
+0.5
-0.6
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.3
+0.3
+0.0
+0.5
-1.5
light
Succinic Acid; Light intensity 9 uM
+0.3
-0.0
+0.2
+0.1
-1.0
light
acetate; Light intensity 38 uM
-0.1
-0.1
-0.0
-0.5
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.4
-0.1
-0.0
+0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.0
-0.2
+0.3
-0.1
light
acetate; Light intensity 38 uM
+0.1
+0.2
+0.2
+0.2
-0.8
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.1
-0.1
+0.4
-0.2
light
Succinic Acid; Light intensity 9 uM
-0.0
-0.0
-0.0
-0.2
+0.5
light
acetate; Light intensity 9 uM
-0.1
-0.1
-0.1
+0.0
+0.5
light
Succinic Acid; Light intensity 75 uM
+0.1
-0.0
+0.1
+0.5
-0.4
light
acetate; Light intensity 18 uM
-0.2
-0.2
+0.1
+0.2
+0.5
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.0
+0.0
+0.4
+0.2
light
Succinic Acid; Light intensity 38 uM
-0.0
+0.1
-0.1
+0.1
+0.6
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.0
+0.1
-0.0
+0.7
light
acetate; Light intensity 18 uM
+0.0
+0.0
+0.0
+0.9
-0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.0
+0.2
+0.3
+0.1
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.1
-0.1
+0.8
+0.8
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.1
+0.5
+1.2
+0.1
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