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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2654 and Rru_A2655 are separated by 51 nucleotides
Rru_A2655 and Rru_A2656 are separated by 24 nucleotides
Rru_A2656 and Rru_A2657 are separated by 97 nucleotides
Rru_A2657 and Rru_A2658 are separated by 13 nucleotides
Rru_A2654: Rru_A2654 - Acylphosphatase (NCBI), at 3,083,183 to 3,083,458
_A2654
Rru_A2655: Rru_A2655 - Intracellular septation protein A (NCBI), at 3,083,510 to 3,084,082
_A2655
Rru_A2656: Rru_A2656 - ATP12 ATPase (NCBI), at 3,084,107 to 3,084,880
_A2656
Rru_A2657: Rru_A2657 - AsmA (NCBI), at 3,084,978 to 3,087,191
_A2657
Rru_A2658: Rru_A2658 - haloacid dehalogenase-like hydrolase (NCBI), at 3,087,205 to 3,087,915
_A2658
Group
Condition
Rru
_A2654
Rru
_A2655
Rru
_A2656
Rru
_A2657
Rru
_A2658
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-1.2
-0.3
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-1.4
-0.0
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-1.7
-0.1
+0.0
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.9
-0.3
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-0.8
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-0.4
-0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.8
+0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.7
+0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
-0.5
-0.3
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.7
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.4
-0.4
-0.6
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.2
-0.4
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-1.5
+1.0
+0.0
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
+0.2
-0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.3
-0.3
-0.4
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
+0.3
-0.4
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.6
-0.3
-0.1
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+0.3
+0.3
-0.3
light
acetate; Light intensity 18 uM
N.D.
N.D.
-0.5
+0.7
+0.1
light
acetate; Light intensity 38 uM
N.D.
N.D.
-0.2
+0.6
+0.3
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
+0.4
+0.8
-0.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+1.3
-0.4
-0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
-1.1
+1.9
+0.1
carbon source
Succinate (C)
N.D.
N.D.
+0.8
+0.1
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.8
+0.2
+0.2
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+1.8
+0.5
-0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+3.2
-0.5
-0.5
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
+1.3
+1.2
-0.1
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+1.9
+1.1
-0.2
light
acetate; Light intensity 38 uM
N.D.
N.D.
+2.0
+1.1
+0.1
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