Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2627 and Rru_A2628 are separated by 50 nucleotidesRru_A2628 and Rru_A2629 are separated by 11 nucleotidesRru_A2629 and Rru_A2630 are separated by 177 nucleotidesRru_A2630 and Rru_A2631 overlap by 8 nucleotides Rru_A2627: Rru_A2627 - Pyridoxamine 5'-phosphate oxidase (NCBI), at 3,056,801 to 3,057,406 _A2627 Rru_A2628: Rru_A2628 - Cation efflux protein (NCBI), at 3,057,457 to 3,058,434 _A2628 Rru_A2629: Rru_A2629 - Beta-lactamase-like (NCBI), at 3,058,446 to 3,059,474 _A2629 Rru_A2630: Rru_A2630 - ROK (NCBI), at 3,059,652 to 3,060,584 _A2630 Rru_A2631: Rru_A2631 - hypothetical protein (NCBI), at 3,060,577 to 3,061,185 _A2631
Group Condition Rru_A2627 Rru_A2628 Rru_A2629 Rru_A2630 Rru_A2631
carbon source Valeric 25 mM; anaerobic N.D. -0.3 -0.1 -0.4 -1.2
light acetate; Light intensity 38 uM N.D. +0.2 +0.0 -1.0 -1.1
light Succinic Acid; Light intensity 18 uM N.D. +0.4 -0.9 -1.2 -0.1
light acetate; Light intensity 9 uM N.D. +0.2 -0.2 -1.0 -0.9
light acetate; Light intensity 18 uM N.D. +0.1 +0.0 -0.9 -1.0
light Succinic Acid; Light intensity 75 uM N.D. -0.3 -0.5 -0.6 -0.2
light acetate; Light intensity 75 uM N.D. +0.1 -0.5 -0.3 -0.8
light Succinic Acid; Light intensity 9 uM N.D. +0.2 +0.0 -0.9 -0.8
light Succinic Acid; Light intensity 75 uM N.D. +0.0 +0.0 -0.6 -0.7
light Succinic Acid; Light intensity 38 uM N.D. +0.0 -0.0 -0.7 -0.2
light Succinic Acid; Light intensity 9 uM N.D. -0.2 -0.3 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.0 -0.2 -0.5 -0.2
light acetate; Light intensity 38 uM N.D. -0.7 -0.9 +0.8 +0.0
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. +0.1 -0.4 +0.5 -0.7
light Succinic Acid; Light intensity 18 uM N.D. -0.3 +0.3 +0.2 -0.7
smn_rich SMN_rich N.D. -0.0 -0.1 -0.3 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. -0.2 -0.2 +0.8 -0.2
smn_rich SMN_rich_noKan N.D. +0.3 +0.0 +0.2 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. -0.2 -0.0 -0.1 +0.5
smn_rich SMN_rich N.D. +0.2 -0.1 -0.3 +0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. +0.2 -0.2 +0.2 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic N.D. +0.0 +0.2 -0.1 +0.5
light acetate; Light intensity 18 uM N.D. +0.2 +0.1 +0.5 -0.3
carbon source Valeric 25 mM; anaerobic N.D. +0.1 +0.1 +0.3 +0.3
carbon source Valeric 25 mM; anaerobic N.D. +0.4 +0.1 +0.1 +0.5
carbon source Hexanoic 21 mM; anaerobic N.D. +0.1 +0.3 +0.8 -0.1
carbon source Hexanoic 21 mM; anaerobic N.D. +0.4 +0.2 +0.7 +0.4
carbon source Hexanoic 21 mM; anaerobic N.D. +0.4 +0.1 +0.4 +0.9
carbon source Hexanoic 21 mM; anaerobic N.D. +0.1 +0.3 +0.8 +0.9
light Succinic Acid; Light intensity 150 uM N.D. -0.4 +0.1 +2.3 +0.4
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Rru_A2627
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Rru_A2628
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Rru_A2631
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