Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2614 and Rru_A2615 are separated by 338 nucleotidesRru_A2615 and Rru_A2616 are separated by 290 nucleotidesRru_A2616 and Rru_A2617 are separated by 52 nucleotidesRru_A2617 and Rru_A2618 are separated by 32 nucleotides Rru_A2614: Rru_A2614 - Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI), at 3,042,919 to 3,043,665 _A2614 Rru_A2615: Rru_A2615 - Transcriptional Regulator, ArsR family (NCBI), at 3,044,004 to 3,044,363 _A2615 Rru_A2616: Rru_A2616 - Histone deacetylase superfamily (NCBI), at 3,044,654 to 3,045,583 _A2616 Rru_A2617: Rru_A2617 - Exonuclease VII, small subunit (NCBI), at 3,045,636 to 3,046,004 _A2617 Rru_A2618: Rru_A2618 - Polyprenyl synthetase (NCBI), at 3,046,037 to 3,046,954 _A2618
Group Condition Rru_A2614 Rru_A2615 Rru_A2616 Rru_A2617 Rru_A2618
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.6 -1.1 -1.1 N.D. N.D.
light acetate; Light intensity 18 uM -0.4 -0.2 -1.2 N.D. N.D.
light Succinic Acid; Light intensity 18 uM -0.2 -1.4 -0.1 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.8 -0.4 -0.0 N.D. N.D.
light acetate; Light intensity 75 uM -0.1 -0.3 -0.8 N.D. N.D.
light acetate; Light intensity 9 uM -0.3 -0.1 -0.8 N.D. N.D.
carbon source Valeric 25 mM; anaerobic -0.0 -0.3 -0.9 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic +0.2 -0.0 -1.2 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.7 -1.0 +0.6 N.D. N.D.
light Succinic Acid; Light intensity 38 uM +0.0 -1.6 +0.5 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic -0.5 +0.5 -1.0 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.8 -0.4 +0.2 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.6 -0.9 +0.6 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.8 -0.3 +0.3 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic +0.4 -0.0 -1.1 N.D. N.D.
light acetate; Light intensity 38 uM +0.1 +0.3 -1.0 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.2 -1.0 N.D. N.D.
light Succinic Acid; Light intensity 75 uM -0.1 -1.0 +0.5 N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.7 -1.0 N.D. N.D.
carbon source Valeric 25 mM; anaerobic +0.0 +0.3 -0.9 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 -1.0 +0.2 N.D. N.D.
anaerboic nitrogen source Low light with ammonium chloride +0.5 +0.1 -0.9 N.D. N.D.
light Succinic Acid; Light intensity 9 uM -0.2 -0.5 +0.4 N.D. N.D.
light acetate; Light intensity 38 uM -0.8 +1.1 -0.5 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.4 -1.1 +0.7 N.D. N.D.
carbon source Valeric 25 mM; anaerobic +0.5 +0.2 -0.6 N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.6 -0.8 +0.6 N.D. N.D.
carbon source Valeric 25 mM; anaerobic +1.0 +0.3 -0.7 N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.8 -0.1 +0.3 N.D. N.D.
light Succinic Acid; Light intensity 18 uM +0.3 -0.1 +0.9 N.D. N.D.
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