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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2585 and Rru_A2586 overlap by 4 nucleotides
Rru_A2586 and Rru_A2587 are separated by 6 nucleotides
Rru_A2587 and Rru_A2588 are separated by 42 nucleotides
Rru_A2588 and Rru_A2589 are separated by 34 nucleotides
Rru_A2585: Rru_A2585 - hypothetical protein (NCBI), at 3,005,983 to 3,006,510
_A2585
Rru_A2586: Rru_A2586 - hypothetical protein (NCBI), at 3,006,507 to 3,006,983
_A2586
Rru_A2587: Rru_A2587 - hypothetical protein (NCBI), at 3,006,990 to 3,008,003
_A2587
Rru_A2588: Rru_A2588 - hypothetical protein (NCBI), at 3,008,046 to 3,008,549
_A2588
Rru_A2589: Rru_A2589 - hypothetical protein (NCBI), at 3,008,584 to 3,009,942
_A2589
Group
Condition
Rru
_A2585
Rru
_A2586
Rru
_A2587
Rru
_A2588
Rru
_A2589
light
Succinic Acid; Light intensity 18 uM
-0.2
N.D.
+0.1
N.D.
-0.7
carbon source
Hexanoic 21 mM; anaerobic
-0.4
N.D.
-0.1
N.D.
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.4
N.D.
-0.6
N.D.
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
N.D.
+0.0
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
N.D.
+0.2
N.D.
-0.5
light
Succinic Acid; Light intensity 150 uM
-0.1
N.D.
-0.0
N.D.
-0.4
smn_rich
SMN_rich_noKan
-0.3
N.D.
+0.1
N.D.
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
N.D.
+0.2
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
N.D.
+0.2
N.D.
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.2
N.D.
+0.2
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
N.D.
+0.2
N.D.
-0.0
light
Succinic Acid; Light intensity 150 uM
+0.3
N.D.
-0.1
N.D.
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.2
N.D.
-0.0
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
+0.3
N.D.
-0.0
N.D.
-0.1
light
Succinic Acid; Light intensity 75 uM
+0.4
N.D.
-0.2
N.D.
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
N.D.
+0.3
N.D.
+0.0
light
acetate; Light intensity 38 uM
+0.3
N.D.
-0.1
N.D.
+0.2
light
Succinic Acid; Light intensity 9 uM
+0.5
N.D.
-0.0
N.D.
-0.0
carbon source
Succinate (C)
+0.4
N.D.
+0.1
N.D.
+0.1
light
acetate; Light intensity 18 uM
+0.1
N.D.
+0.1
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
N.D.
+0.0
N.D.
+0.4
light
acetate; Light intensity 18 uM
+0.3
N.D.
+0.2
N.D.
+0.2
light
Succinic Acid; Light intensity 18 uM
+0.4
N.D.
-0.3
N.D.
+0.7
anaerboic nitrogen source
SMN_rich_anaerobic
+0.2
N.D.
+0.0
N.D.
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.5
N.D.
+0.3
N.D.
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.4
N.D.
+0.4
N.D.
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.3
N.D.
+0.2
N.D.
+0.9
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.5
N.D.
+0.3
N.D.
+0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.5
N.D.
+0.3
N.D.
+1.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
N.D.
+0.3
N.D.
+1.0
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