Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2555 and Rru_A2556 are separated by 278 nucleotidesRru_A2556 and Rru_A2557 are separated by 4 nucleotidesRru_A2557 and Rru_A2558 are separated by 258 nucleotidesRru_A2558 and Rru_A2559 are separated by 23 nucleotides Rru_A2555: Rru_A2555 - Putative diguanylate cyclase (GGDEF domain) (NCBI), at 2,971,307 to 2,972,344 _A2555 Rru_A2556: Rru_A2556 - Mandelate racemase/muconate lactonizing enzyme (NCBI), at 2,972,623 to 2,973,624 _A2556 Rru_A2557: Rru_A2557 - Protein of unknown function DUF1611 (NCBI), at 2,973,629 to 2,974,636 _A2557 Rru_A2558: Rru_A2558 - Transglutaminase-like (NCBI), at 2,974,895 to 2,978,167 _A2558 Rru_A2559: Rru_A2559 - hypothetical protein (NCBI), at 2,978,191 to 2,980,914 _A2559
Group Condition Rru_A2555 Rru_A2556 Rru_A2557 Rru_A2558 Rru_A2559
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.3 -1.0 -1.0 -0.2 -0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.3 -0.3 -0.6 -0.3 +0.1
light acetate; Light intensity 38 uM -0.0 -0.6 -0.2 -0.0 -0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 -0.4 -0.3 -0.1 -0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 -0.4 -0.4 -0.2 -0.2
light acetate; Light intensity 9 uM -0.1 -0.0 -0.4 -0.0 -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.2 -0.7 -0.2 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.3 -0.3 -0.2 +0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.2 -0.4 +0.1 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.2 -0.4 +0.1 -0.2 -0.2
carbon source Valeric 25 mM; anaerobic -0.1 +0.2 -0.8 -0.0 -0.1
light Succinic Acid; Light intensity 18 uM +0.1 +0.3 -0.4 -0.0 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 -0.4 +0.4 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 -0.4 +0.4 -0.0 -0.1
carbon source Hexanoic 21 mM; anaerobic -0.2 +0.7 -0.3 +0.1 -0.1
light acetate; Light intensity 38 uM -0.3 +0.7 -0.1 +0.1 +0.0
light Succinic Acid; Light intensity 18 uM -0.4 +0.2 +0.4 -0.0 +0.5
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 +0.7 +0.3 -0.1 -0.0
light Succinic Acid; Light intensity 75 uM -0.2 +0.8 +0.1 -0.1 +0.1
light acetate; Light intensity 18 uM +0.2 -0.0 +0.4 +0.2 -0.0
carbon source Hexanoic 21 mM; anaerobic +0.3 +0.3 +0.5 -0.1 -0.2
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.6 +0.5 -0.0 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 +0.5 +0.7 -0.0 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.4 +0.7 -0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.0 +0.9 +0.7 -0.1 -0.1
light Succinic Acid; Light intensity 150 uM +0.1 +0.6 +0.4 -0.1 +0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.1 +0.8 +0.4 +0.1 +0.3
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.9 +0.8 -0.1 -0.0
light Succinic Acid; Light intensity 150 uM +0.2 +1.6 +0.3 -0.1 +0.3
carbon source Hexanoic 21 mM; anaerobic +0.1 +1.5 +0.8 -0.0 +0.0
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