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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2538 and Rru_A2539 are separated by 98 nucleotides
Rru_A2539 and Rru_A2540 are separated by 67 nucleotides
Rru_A2540 and Rru_A2541 are separated by 0 nucleotides
Rru_A2541 and Rru_A2542 are separated by 405 nucleotides
Rru_A2538: Rru_A2538 - hypothetical protein (NCBI), at 2,952,221 to 2,952,718
_A2538
Rru_A2539: Rru_A2539 - hypothetical protein (NCBI), at 2,952,817 to 2,953,326
_A2539
Rru_A2540: Rru_A2540 - Major facilitator superfamily protein MFS_1 (NCBI), at 2,953,394 to 2,954,560
_A2540
Rru_A2541: Rru_A2541 - hypothetical protein (NCBI), at 2,954,561 to 2,955,148
_A2541
Rru_A2542: Rru_A2542 - circadian clock protein KaiC (NCBI), at 2,955,554 to 2,957,236
_A2542
Group
Condition
Rru
_A2538
Rru
_A2539
Rru
_A2540
Rru
_A2541
Rru
_A2542
light
Succinic Acid; Light intensity 18 uM
-0.9
-0.5
-0.1
+0.2
+0.1
light
acetate; Light intensity 38 uM
-0.1
-1.1
+0.1
+0.7
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.9
+0.3
+0.7
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.9
+0.9
-0.2
-0.1
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.7
+0.1
-0.0
+0.4
+0.4
light
acetate; Light intensity 18 uM
-0.3
-0.2
+0.5
+0.1
+0.2
carbon source
Valeric 25 mM; anaerobic
-0.4
-0.1
+0.2
+0.6
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.7
+0.3
+0.1
+0.1
+0.4
light
Succinic Acid; Light intensity 9 uM
-0.1
-0.6
+0.1
+0.6
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.3
-0.2
+0.1
+0.4
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
+0.8
-0.2
-0.1
+0.5
light
Succinic Acid; Light intensity 38 uM
-0.3
-0.3
+0.0
+0.8
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.6
+0.0
+0.0
+0.6
+0.6
light
acetate; Light intensity 9 uM
-0.4
-0.3
+0.0
+1.1
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-0.6
+0.0
+1.1
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-0.4
+0.4
+1.4
+0.0
light
acetate; Light intensity 75 uM
-0.4
+0.3
-0.1
+0.9
+0.2
light
Succinic Acid; Light intensity 150 uM
-0.5
+0.8
+0.1
+0.4
+0.2
light
acetate; Light intensity 38 uM
-0.6
+0.5
+0.1
+1.0
+0.1
light
acetate; Light intensity 18 uM
-0.1
+0.0
+0.0
+1.0
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.3
-0.2
+0.4
+1.3
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.2
+0.5
+0.2
+0.0
+0.5
light
Succinic Acid; Light intensity 9 uM
+0.3
+0.2
+0.0
+1.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.5
+0.3
+1.1
+0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.1
+0.0
+1.4
+0.3
light
Succinic Acid; Light intensity 75 uM
-0.1
-0.3
+0.2
+1.7
+0.5
light
Succinic Acid; Light intensity 18 uM
+1.0
-0.5
+0.3
+1.7
+0.4
light
Succinic Acid; Light intensity 75 uM
+0.1
+0.2
+0.0
+2.2
+0.8
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.5
+0.7
+0.2
+2.1
+1.0
light
Succinic Acid; Light intensity 150 uM
+0.5
+1.9
+0.1
+1.4
+0.3
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Rru_A2540
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