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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2530 and Rru_A2531 overlap by 4 nucleotides
Rru_A2531 and flgE are separated by 11 nucleotides
flgE and Rru_A2533 are separated by 51 nucleotides
Rru_A2533 and Rru_A2534 are separated by 316 nucleotides
Rru_A2530: Rru_A2530 - hypothetical protein (NCBI), at 2,944,838 to 2,945,350
_A2530
Rru_A2531: Rru_A2531 - hypothetical protein (NCBI), at 2,945,347 to 2,945,634
_A2531
Rru_A2532: flgE - flagellar hook protein FlgE (RefSeq), at 2,945,646 to 2,947,028
flgE
Rru_A2533: Rru_A2533 - Flagellar hook capping protein (NCBI), at 2,947,080 to 2,947,769
_A2533
Rru_A2534: Rru_A2534 - Flagellin-like (NCBI), at 2,948,086 to 2,948,982
_A2534
Group
Condition
Rru
_A2530
Rru
_A2531
Rru
_A2532
Rru
_A2533
Rru
_A2534
flgE
light
acetate; Light intensity 38 uM
+0.0
-0.7
-0.5
-0.5
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.7
-0.8
+0.0
+0.2
-0.0
carbon source
Valeric 25 mM; anaerobic
-0.5
-1.1
+0.5
-0.1
-0.1
carbon source
Succinate (C)_noKan
-0.7
-0.0
-0.2
-0.2
-0.0
carbon source
Succinate (C)_noKan
-0.6
+0.0
-0.3
-0.1
-0.1
light
acetate; Light intensity 18 uM
-0.2
-0.2
-0.5
+0.0
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.7
-0.3
+0.0
-0.1
+0.1
carbon source
Succinate (C)_noKan
-0.7
+0.3
-0.1
-0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.8
+0.1
+0.0
+0.1
carbon source
Succinate (C)
-0.6
+0.1
-0.3
+0.1
-0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-0.6
-0.2
+0.3
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.4
-0.6
+0.0
+0.1
carbon source
Succinate (C)
-0.6
+0.4
-0.1
-0.0
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.5
+0.0
+0.1
+0.3
smn_rich
SMN_rich
-0.7
+0.4
+0.0
-0.0
+0.0
carbon source
Succinate (C)
-0.5
+0.3
-0.1
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.5
+0.3
-0.0
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.6
+0.8
-0.4
-0.2
+0.2
light
Succinic Acid; Light intensity 18 uM
+0.8
-1.1
+0.2
-0.2
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.8
+0.7
-0.1
-0.0
+0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.0
-1.7
+0.8
+0.9
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
+0.6
-0.1
-0.2
+0.2
light
Succinic Acid; Light intensity 18 uM
-0.6
+0.4
-0.1
+0.6
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
+0.7
-0.2
-0.0
+0.2
light
Succinic Acid; Light intensity 75 uM
+0.5
-0.6
-0.1
+0.4
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.7
-0.2
+0.0
-0.1
light
acetate; Light intensity 18 uM
+0.7
-0.1
+0.2
-0.4
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.6
+0.7
+0.1
+0.4
+0.2
light
Succinic Acid; Light intensity 150 uM
+0.9
-0.3
+0.1
+0.1
+0.1
light
Succinic Acid; Light intensity 150 uM
+0.9
+0.0
+0.1
-0.1
+0.2
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