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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2522 and Rru_A2523 are separated by 150 nucleotides
Rru_A2523 and Rru_A2524 are separated by 57 nucleotides
Rru_A2524 and Rru_A2525 are separated by 14 nucleotides
Rru_A2525 and Rru_A2526 overlap by 8 nucleotides
Rru_A2522: Rru_A2522 - conserved hypothetical protein PA0741 (NCBI), at 2,937,429 to 2,938,040
_A2522
Rru_A2523: Rru_A2523 - Predicted transcriptional regulator (NCBI), at 2,938,191 to 2,938,598
_A2523
Rru_A2524: Rru_A2524 - Peptidase U32 (NCBI), at 2,938,656 to 2,939,558
_A2524
Rru_A2525: Rru_A2525 - Peptidase U32 (NCBI), at 2,939,573 to 2,940,577
_A2525
Rru_A2526: Rru_A2526 - hypothetical protein (NCBI), at 2,940,570 to 2,941,253
_A2526
Group
Condition
Rru
_A2522
Rru
_A2523
Rru
_A2524
Rru
_A2525
Rru
_A2526
carbon source
Valeric 25 mM; anaerobic
-0.0
-0.3
-3.0
-3.7
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.3
-3.1
-2.9
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.0
-1.2
-2.0
-2.5
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.6
-3.0
-3.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
+0.1
-2.8
-2.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.4
+0.0
-2.6
-2.8
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.9
-2.8
-3.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
-0.4
-1.9
-2.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.6
-0.2
-2.5
-2.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
+0.0
-2.2
-2.3
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.7
-0.3
-2.6
-2.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.3
-2.2
-2.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
+0.2
-2.4
-2.2
N.D.
light
acetate; Light intensity 18 uM
+0.3
+0.6
-2.7
-2.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
+0.4
-2.5
-2.2
N.D.
light
Succinic Acid; Light intensity 38 uM
-0.3
+0.6
-2.2
-2.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.0
+0.7
-2.1
-2.4
N.D.
light
acetate; Light intensity 9 uM
+0.4
+0.2
-2.4
-2.0
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.0
+1.0
-2.2
-2.5
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.4
-2.0
-2.0
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.5
-2.0
-1.7
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.3
+0.1
-1.9
-1.8
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.1
+0.1
-1.8
-1.6
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.0
-0.3
-1.6
-1.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.7
-1.9
-1.9
N.D.
light
acetate; Light intensity 38 uM
+0.3
+0.6
-1.9
-2.0
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.2
+0.6
-1.9
-1.7
N.D.
light
Succinic Acid; Light intensity 9 uM
+0.0
+0.1
-1.3
-1.3
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.6
+0.2
-1.6
-1.5
N.D.
light
acetate; Light intensity 75 uM
+0.4
+0.9
-1.5
-1.3
N.D.
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