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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2510 and Rru_A2511 are separated by 169 nucleotides
Rru_A2511 and Rru_A2512 are separated by 21 nucleotides
Rru_A2512 and Rru_A2513 are separated by 146 nucleotides
Rru_A2513 and Rru_A2514 are separated by 138 nucleotides
Rru_A2510: Rru_A2510 - hypothetical protein (NCBI), at 2,917,522 to 2,918,076
_A2510
Rru_A2511: Rru_A2511 - Putative diguanylate cyclase (GGDEF domain) (NCBI), at 2,918,246 to 2,920,306
_A2511
Rru_A2512: Rru_A2512 - 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI), at 2,920,328 to 2,921,056
_A2512
Rru_A2513: Rru_A2513 - Acetyl-CoA hydrolase/transferase (NCBI), at 2,921,203 to 2,922,642
_A2513
Rru_A2514: Rru_A2514 - Twin-arginine translocation pathway signal (NCBI), at 2,922,781 to 2,923,344
_A2514
Group
Condition
Rru
_A2510
Rru
_A2511
Rru
_A2512
Rru
_A2513
Rru
_A2514
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-2.5
-0.1
-3.3
-1.5
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.8
-0.0
-2.7
-0.1
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.9
+0.1
-3.6
-0.8
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-4.3
-0.2
-0.6
-0.2
-0.5
carbon source
Valeric 25 mM; anaerobic
-1.9
+0.1
-2.9
-0.1
-0.6
light
Succinic Acid; Light intensity 18 uM
-2.2
-0.4
-1.7
+0.1
-0.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.4
+0.0
-2.8
-0.9
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.7
+0.1
-1.8
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.5
-0.1
-2.5
-1.5
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.8
-0.2
-1.2
+0.0
-0.2
light
Succinic Acid; Light intensity 9 uM
-1.8
-0.0
-1.2
+0.1
-0.2
light
Succinic Acid; Light intensity 38 uM
-0.8
-0.2
-2.2
-0.0
+0.1
light
Succinic Acid; Light intensity 75 uM
-0.7
-0.1
-2.2
-0.2
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.2
-1.2
-1.2
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.8
-0.4
-2.2
-0.1
+0.8
carbon source
Hexanoic 21 mM; anaerobic
-1.4
-0.0
-0.9
-0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.2
-1.1
-1.1
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.0
-0.1
-1.4
+0.1
-0.1
carbon source
Valeric 25 mM; anaerobic
-1.3
-0.2
-0.7
-0.1
-0.2
light
Succinic Acid; Light intensity 75 uM
-1.6
-0.2
-0.6
-0.0
+0.0
carbon source
Valeric 25 mM; anaerobic
-1.8
-0.1
-0.2
-0.3
+0.0
smn_rich
SMN_rich_noKan
-1.0
+0.0
-1.2
+0.0
-0.1
light
Succinic Acid; Light intensity 9 uM
-0.8
-0.1
-1.4
-0.2
+0.3
smn_rich
SMN_rich
-1.3
+0.0
-1.0
+0.0
+0.0
smn_rich
SMN_rich_noKan
-0.7
+0.0
-0.9
+0.1
-0.5
carbon source
Hexanoic 21 mM; anaerobic
+0.7
-0.1
+1.0
-0.3
+0.4
light
Succinic Acid; Light intensity 18 uM
+1.2
+0.3
+0.2
-0.4
+0.5
light
Succinic Acid; Light intensity 150 uM
+2.0
-0.1
+0.3
-0.2
+0.4
light
acetate; Light intensity 18 uM
+1.5
+0.2
+0.7
-0.2
+0.3
light
Succinic Acid; Light intensity 150 uM
+1.5
-0.1
+1.6
+0.0
+0.2
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