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Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2458 and Rru_A2459 overlap by 4 nucleotides
Rru_A2459 and Rru_A2460 are separated by 502 nucleotides
Rru_A2460 and Rru_A2461 are separated by 127 nucleotides
Rru_A2461 and Rru_A2462 are separated by 58 nucleotides
Rru_A2458: Rru_A2458 - Protein of unknown function DUF482 (NCBI), at 2,856,318 to 2,857,589
_A2458
Rru_A2459: Rru_A2459 - Protein of unknown function DUF924 (NCBI), at 2,857,586 to 2,858,191
_A2459
Rru_A2460: Rru_A2460 - chemotaxis sensory transducer (NCBI), at 2,858,694 to 2,860,391
_A2460
Rru_A2461: Rru_A2461 - CHAP (NCBI), at 2,860,519 to 2,861,190
_A2461
Rru_A2462: Rru_A2462 - Enzymatic protein of unknown function (NCBI), at 2,861,249 to 2,862,418
_A2462
Group
Condition
Rru
_A2458
Rru
_A2459
Rru
_A2460
Rru
_A2461
Rru
_A2462
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.4
-0.5
-0.4
N.D.
-0.6
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.5
-0.0
N.D.
-1.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.2
+0.2
N.D.
-1.1
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.2
+0.2
N.D.
-1.1
light
acetate; Light intensity 18 uM
-0.4
+0.2
-0.2
N.D.
-0.9
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.1
-0.2
N.D.
-0.8
light
Succinic Acid; Light intensity 75 uM
-0.1
-0.4
-0.1
N.D.
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.4
-0.0
N.D.
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-0.5
-0.3
N.D.
-0.3
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.6
-0.3
N.D.
-0.1
light
Succinic Acid; Light intensity 38 uM
-0.1
-0.0
-0.2
N.D.
-0.4
light
acetate; Light intensity 38 uM
-0.1
+0.0
-0.0
N.D.
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-0.5
-0.0
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
-0.2
-0.4
N.D.
+0.3
light
Succinic Acid; Light intensity 18 uM
-0.3
-0.5
-0.0
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.3
-0.3
-0.2
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.3
-0.2
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
-0.3
-0.3
N.D.
+0.3
light
acetate; Light intensity 9 uM
-0.3
+0.1
+0.1
N.D.
-0.3
light
Succinic Acid; Light intensity 18 uM
-0.0
+0.6
-0.0
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.2
-0.2
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.2
-0.1
-0.1
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.2
-0.1
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.2
-0.1
-0.1
N.D.
+0.3
light
Succinic Acid; Light intensity 9 uM
-0.0
+0.3
-0.1
N.D.
-0.2
anaerboic nitrogen source
Low light with ammonium chloride
+0.1
-0.2
-0.1
N.D.
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.4
+0.1
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.0
-0.1
N.D.
+0.5
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.7
-0.0
N.D.
-0.3
light
Succinic Acid; Light intensity 150 uM
-0.0
+0.0
-0.1
N.D.
+0.6
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